RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 ATN1P54259 1190 aaPredicted RBP12.84□□□□□ -0.35
MSH5-204ENST00000375755 DNAJB13P59910 316 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 IFITM2Q01629 132 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 PIGFQ07326 219 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 BNIP2Q12982 314 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 CTBP1Q13363 440 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 POLD3Q15054 466 aaPredicted RBP12.84□□□□□ -0.35
MSH5-204ENST00000375755 MAPRE1Q15691 268 aaKnown RBP12.84□□□□□ -0.35
MSH5-204ENST00000375755 PYCR3Q53H96 274 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 SLC24A5Q71RS6 500 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 R3HCC1LQ7Z5L2 792 aaKnown RBP12.84□□□□□ -0.35
MSH5-204ENST00000375755 ITIH5Q86UX2 942 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 TTC30BQ8N4P2 665 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 C3orf30Q96M34 536 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 CSNK1G1Q9HCP0 422 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 A0A0J9YYE9 177 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 MOXD2PA6NHM9 499 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 ALBP02768 609 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 CYP11A1P05108 521 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 GPIP06744 558 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 IL7RP16871 459 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 GSTM2P28161 218 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 CD68P34810 354 aaPredicted RBP12.84□□□□□ -0.35
MSH5-204ENST00000375755 CLCQ05315 142 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 CBX2Q14781 532 aaPredicted RBP12.84□□□□□ -0.35
MSH5-204ENST00000375755 DDR2Q16832 855 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 ARL13BQ3SXY8 428 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 OTUD3Q5T2D3 398 aaPredicted RBP12.84□□□□□ -0.35
MSH5-204ENST00000375755 LARP4Q71RC2 724 aaKnown RBP eCLIP12.84□□□□□ -0.35
MSH5-204ENST00000375755 VASH1Q7L8A9 365 aaPredicted RBP12.84□□□□□ -0.35
MSH5-204ENST00000375755 TAC4Q86UU9 113 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 METTL23Q86XA0 190 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.84□□□□□ -0.35
MSH5-204ENST00000375755 NPWQ8N729 165 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 GOLM1Q8NBJ4 401 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 SLC22A17Q8WUG5 538 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 SUSD3Q96L08 255 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 MRPL57Q9BQC6 102 aaKnown RBP12.84□□□□□ -0.35
MSH5-204ENST00000375755 DGCR6LQ9BY27 220 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 ADNPQ9H2P0 1102 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 ABI2Q9NYB9 513 aaPredicted RBP12.84□□□□□ -0.35
MSH5-204ENST00000375755 UBP1Q9NZI7 540 aa12.84□□□□□ -0.35
MSH5-204ENST00000375755 ZFC3H1O60293 1989 aaKnown RBP12.84□□□□□ -0.35
MSH5-204ENST00000375755 FAM95CA0A1B0GW59 222 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 TCRBV5S2A0A599 114 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 ARVCFO00192 962 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 HTR1AP08908 422 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 FCGR1AP12314 374 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 STMN1P16949 149 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 TSPAN8P19075 237 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 SLC6A2P23975 617 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 ADRA1BP35368 520 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 YWHAHQ04917 246 aaPredicted RBP12.83□□□□□ -0.36
MSH5-204ENST00000375755 CAMK2BQ13554 666 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 UGT3A2Q3SY77 523 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 SMUG1Q53HV7 270 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 NOMO2Q5JPE7 1267 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 GLB1LQ6UWU2 654 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 PLEKHG7Q6ZR37 379 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 CYP2U1Q7Z449 544 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 TFAP2DQ7Z6R9 452 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 IFNEQ86WN2 208 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 SCN4BQ8IWT1 228 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 MFSD4AQ8N468 514 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 SLC43A3Q8NBI5 491 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 PXYLP1Q8TE99 480 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 IL12RB2Q99665 862 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 SLC30A3Q99726 388 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 HOPXQ9BPY8 73 aaPredicted RBP12.83□□□□□ -0.36
MSH5-204ENST00000375755 TKTL2Q9H0I9 626 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 ING2Q9H160 280 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 CNGB3Q9NQW8 809 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 INTS10Q9NVR2 710 aaKnown RBP12.83□□□□□ -0.36
MSH5-204ENST00000375755 GIMAP2Q9UG22 337 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 ATP11BQ9Y2G3 1177 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 V9GYQ6 96 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 H0YAE9 185 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 PSMD11O00231 422 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 EEF2KO00418 725 aaKnown RBP12.83□□□□□ -0.36
MSH5-204ENST00000375755 EIF2S1P05198 315 aaKnown RBP12.83□□□□□ -0.36
MSH5-204ENST00000375755 CRHBPP24387 322 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 GRIK1P39086 918 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 NKX2-5P52952 324 aaPredicted RBP12.83□□□□□ -0.36
MSH5-204ENST00000375755 TAS2R39P59534 338 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 TSPY1Q01534 308 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 LRRC8DQ7L1W4 858 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 LINC00523Q86TU6 105 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 SLCO6A1Q86UG4 719 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 TMEM173Q86WV6 379 aaPredicted RBP12.83□□□□□ -0.36
MSH5-204ENST00000375755 AFAP1L2Q8N4X5 818 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 MINDY1Q8N5J2 469 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 ZNF639Q9UID6 485 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 STAP1Q9ULZ2 295 aa12.83□□□□□ -0.36
MSH5-204ENST00000375755 MAGEB16A2A368 324 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 A6NL46 340 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 A8MT66 165 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 UBFD1O14562 309 aaKnown RBP12.82□□□□□ -0.36
MSH5-204ENST00000375755 PQBP1O60828 265 aaKnown RBP12.82□□□□□ -0.36
MSH5-204ENST00000375755 LDLRP01130 860 aa12.82□□□□□ -0.36
MSH5-204ENST00000375755 NPY2RP49146 381 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms