RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 PCBP1Q15365 356 aaKnown RBP eCLIP12.08□□□□□ -0.48
C9orf3-203ENST00000375315 NPTX1Q15818 432 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 ZFP69Q49AA0 526 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 TJAP1Q5JTD0 557 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 CLLU1OSQ5K130 101 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 SNAP47Q5SQN1 464 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 HACD2Q6Y1H2 254 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 R3HCC1LQ7Z5L2 792 aaKnown RBP12.08□□□□□ -0.48
C9orf3-203ENST00000375315 SLC51BQ86UW2 128 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 SPPL2CQ8IUH8 684 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 TRPV3Q8NET8 790 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 RDH11Q8TC12 318 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 PCED1BQ96HM7 432 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 PAWRQ96IZ0 340 aaKnown RBP12.08□□□□□ -0.48
C9orf3-203ENST00000375315 TSNARE1Q96NA8 513 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 VPS35Q96QK1 796 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 TMEM246Q9BRR3 403 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 DHX35Q9H5Z1 703 aaKnown RBP12.08□□□□□ -0.48
C9orf3-203ENST00000375315 CRTAC1Q9NQ79 661 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 NECTIN3Q9NQS3 549 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 CHST12Q9NRB3 414 aa12.08□□□□□ -0.48
C9orf3-203ENST00000375315 PGAM1P18669 254 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 PKLRP30613 574 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 RRM2P31350 389 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 LBX1P52954 281 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 GALK2Q01415 458 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 SLC24A5Q71RS6 500 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 SVOPQ8N4V2 548 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 MYRFLQ96LU7 910 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 SLA2Q9H6Q3 261 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 TMEM30AQ9NV96 361 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 INTS10Q9NVR2 710 aaKnown RBP12.07□□□□□ -0.48
C9orf3-203ENST00000375315 ABI2Q9NYB9 513 aaPredicted RBP12.07□□□□□ -0.48
C9orf3-203ENST00000375315 CCDC167Q9P0B6 97 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 DERAQ9Y315 318 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 CCDC78A2IDD5 438 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 PDZK1P1A8MUH7 402 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 APOL1O14791 398 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 NRP2O60462 931 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 NDUFS2O75306 463 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 GABARAPO95166 117 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 METTL18O95568 372 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 JUNP05412 331 aaKnown RBP12.07□□□□□ -0.48
C9orf3-203ENST00000375315 GPIP06744 558 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 USP17L7P0C7H9 530 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 MSL3P1P0C860 447 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 ACRP10323 421 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 TGM2P21980 687 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 IL12AP29459 219 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 PNPLA4P41247 253 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 GRIA1P42261 906 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 MAGEA12P43365 314 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 CCR10P46092 362 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 NAGLUP54802 743 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 RACK1P63244 317 aaKnown RBP12.07□□□□□ -0.48
C9orf3-203ENST00000375315 BNIP2Q12982 314 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 UPP1Q16831 310 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 DESI1Q6ICB0 168 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 ZNF544Q6NX49 715 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 ZYG11AQ6WRX3 759 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 UTS2BQ765I0 119 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 THAP5Q7Z6K1 395 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 FAM131BQ86XD5 332 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 CDKL3Q8IVW4 592 aaPredicted RBP12.07□□□□□ -0.48
C9orf3-203ENST00000375315 GALNT12Q8IXK2 581 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 OR13J1Q8NGT2 312 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 ISL2Q96A47 359 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 TNIP3Q96KP6 325 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 RNF157Q96PX1 679 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 ACE2Q9BYF1 805 aaPredicted RBP12.07□□□□□ -0.48
C9orf3-203ENST00000375315 SLC7A5P2Q9GIP4 190 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 MTMR10Q9NXD2 777 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 NPAP1Q9NZP6 1156 aa12.07□□□□□ -0.48
C9orf3-203ENST00000375315 UBA2Q9UBT2 640 aaPredicted RBP12.07□□□□□ -0.48
C9orf3-203ENST00000375315 BMP1P13497 986 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 IMPDH1P20839 514 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 TPD52P55327 224 aaPredicted RBP12.06□□□□□ -0.48
C9orf3-203ENST00000375315 HSPA14Q0VDF9 509 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 PRPSAP1Q14558 356 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 AGAP6Q5VW22 663 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 HFE2Q6ZVN8 426 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.06□□□□□ -0.48
C9orf3-203ENST00000375315 PLD5Q8N7P1 536 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 TTC9Q92623 222 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 HDAC2Q92769 488 aaKnown RBP12.06□□□□□ -0.48
C9orf3-203ENST00000375315 AGAP4Q96P64 663 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 NAT9Q9BTE0 207 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 DNAI2Q9GZS0 605 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 DSN1Q9H410 356 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 TMLHEQ9NVH6 421 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 SYBUQ9NX95 663 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 PCDHB7Q9Y5E2 793 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 LDLRP01130 860 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 MLNP12872 115 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 ETV3P41162 512 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 SEPHS1P49903 392 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 ZNF135P52742 658 aaPredicted RBP12.06□□□□□ -0.48
C9orf3-203ENST00000375315 GABARAPL2P60520 117 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 NOMO2Q5JPE7 1267 aa12.06□□□□□ -0.48
C9orf3-203ENST00000375315 OVOS1Q6IE37 1185 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms