RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 UGT1A1P22309 533 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 PTAFRP25105 342 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 GTF2H1P32780 548 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 CNKSR3Q6P9H4 555 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 SHC4Q6S5L8 630 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 HEATR3Q7Z4Q2 680 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 CAMKMTQ7Z624 323 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 FRMD5Q7Z6J6 570 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 NRROSQ86YC3 692 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 SLC9A9Q8IVB4 645 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 REM2Q8IYK8 340 aaPredicted RBP8.97□□□□□ -0.97
UBR4-201ENST00000375218 NAPBQ9H115 298 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 MAGEF1Q9HAY2 307 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 LTB4R2Q9NPC1 389 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 TLR8Q9NR97 1041 aaKnown RBP8.97□□□□□ -0.97
UBR4-201ENST00000375218 ZDHHC18Q9NUE0 388 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 FBXO28Q9NVF7 368 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 VPS54Q9P1Q0 977 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 KCNN3Q9UGI6 736 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 ANAPC2Q9UJX6 822 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 GPR55Q9Y2T6 319 aaPredicted RBP8.97□□□□□ -0.97
UBR4-201ENST00000375218 USP3Q9Y6I4 520 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 STX16O14662 325 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 NUPL2O15504 423 aaKnown RBP8.97□□□□□ -0.97
UBR4-201ENST00000375218 CALUO43852 315 aaPredicted RBP8.97□□□□□ -0.97
UBR4-201ENST00000375218 SERPINF2P08697 491 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 HNF1AP20823 631 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 SLC1A6P48664 564 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 SMSP52788 366 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 YWHAEP62258 255 aaKnown RBP8.97□□□□□ -0.97
UBR4-201ENST00000375218 ATP2C1P98194 919 aaPredicted RBP8.97□□□□□ -0.97
UBR4-201ENST00000375218 UBAP2LQ14157 1087 aaKnown RBP8.97□□□□□ -0.97
UBR4-201ENST00000375218 SCARA5Q6ZMJ2 495 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 UNC5AQ6ZN44 842 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 ELMOD2Q8IZ81 293 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 FAM71BQ8TC56 605 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 TEPSINQ96N21 525 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 FBXO44Q9H4M3 255 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 HCFC1R1Q9NWW0 138 aa8.97□□□□□ -0.97
UBR4-201ENST00000375218 RUVBL2Q9Y230 463 aaKnown RBP8.97□□□□□ -0.97
UBR4-201ENST00000375218 ARHGEF35A5YM69 484 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 BUB1BO60566 1050 aaPredicted RBP8.96□□□□□ -0.97
UBR4-201ENST00000375218 RHBDL1O75783 438 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 ACRP10323 421 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 GUCY1A3Q02108 690 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 ZNF45Q02386 682 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 PRSS53Q2L4Q9 553 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 SBK1Q52WX2 424 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 HERC4Q5GLZ8 1057 aaPredicted RBP8.96□□□□□ -0.97
UBR4-201ENST00000375218 PIP5KL1Q5T9C9 394 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 CDC42EP5Q6NZY7 148 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 ZNF573Q86YE8 665 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 PLD3Q8IV08 490 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 SERPINA12Q8IW75 414 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 CCDC117Q8IWD4 279 aaPredicted RBP8.96□□□□□ -0.97
UBR4-201ENST00000375218 OR1E3Q8WZA6 343 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 CTSFQ9UBX1 484 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 BTBD18B2RXH4 712 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 CYP7A1P22680 504 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 CCNE1P24864 410 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 PSMC5P62195 406 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 DMP1Q13316 513 aaPredicted RBP8.96□□□□□ -0.97
UBR4-201ENST00000375218 IFI44LQ53G44 452 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 PYHIN1Q6K0P9 492 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 MFSD5Q6N075 450 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 CHADLQ6NUI6 762 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 ZNF438Q7Z4V0 828 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 S100A7AQ86SG5 101 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 DDHD1Q8NEL9 900 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 ADCY4Q8NFM4 1077 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 WDR48Q8TAF3 677 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 PTCD2Q8WV60 388 aaKnown RBP8.96□□□□□ -0.97
UBR4-201ENST00000375218 TPD52L3Q96J77 140 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 MIR1-1HGQ9H1L0 117 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 BCAS3Q9H6U6 928 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 RCOR3Q9P2K3 495 aaPredicted RBP8.96□□□□□ -0.97
UBR4-201ENST00000375218 HPSEQ9Y251 543 aa8.96□□□□□ -0.97
UBR4-201ENST00000375218 SAMHD1Q9Y3Z3 626 aaKnown RBP8.96□□□□□ -0.97
UBR4-201ENST00000375218 B8ZZF3 427 aa8.96□□□□□ -0.98
UBR4-201ENST00000375218 CYR61O00622 381 aa8.96□□□□□ -0.98
UBR4-201ENST00000375218 TGFB1I1O43294 461 aa8.96□□□□□ -0.98
UBR4-201ENST00000375218 CRCPO75575 148 aa8.96□□□□□ -0.98
UBR4-201ENST00000375218 THP07101 528 aa8.96□□□□□ -0.98
UBR4-201ENST00000375218 CLEC2LP0C7M8 214 aa8.96□□□□□ -0.98
UBR4-201ENST00000375218 SNHG28P0DPA3 235 aa8.96□□□□□ -0.98
UBR4-201ENST00000375218 SNTA1Q13424 505 aa8.96□□□□□ -0.98
UBR4-201ENST00000375218 FAM98BQ52LJ0 330 aaKnown RBP8.96□□□□□ -0.98
UBR4-201ENST00000375218 SEL1L2Q5TEA6 688 aa8.96□□□□□ -0.98
UBR4-201ENST00000375218 RNLSQ5VYX0 342 aa8.96□□□□□ -0.98
UBR4-201ENST00000375218 STEAP3Q658P3 488 aa8.96□□□□□ -0.98
UBR4-201ENST00000375218 TTC27Q6P3X3 843 aa8.96□□□□□ -0.98
UBR4-201ENST00000375218 MTSS1LQ765P7 747 aa8.96□□□□□ -0.98
UBR4-201ENST00000375218 FAM217AQ8IXS0 508 aa8.96□□□□□ -0.98
UBR4-201ENST00000375218 ACTRT2Q8TDY3 377 aa8.96□□□□□ -0.98
UBR4-201ENST00000375218 CRYGNQ8WXF5 182 aa8.96□□□□□ -0.98
UBR4-201ENST00000375218 GLIS2Q9BZE0 524 aaPredicted RBP8.96□□□□□ -0.98
UBR4-201ENST00000375218 ARHGEF3Q9NR81 526 aa8.96□□□□□ -0.98
UBR4-201ENST00000375218 NDUFA13Q9P0J0 144 aa8.96□□□□□ -0.98
UBR4-201ENST00000375218 IFT52Q9Y366 437 aa8.96□□□□□ -0.98
UBR4-201ENST00000375218 TEX264Q9Y6I9 313 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms