RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 PPP4R2Q9NY27 417 aa12.05□□□□□ -0.48
HDAC8-204ENST00000373560 FAM13BQ9NYF5 915 aa12.05□□□□□ -0.48
HDAC8-204ENST00000373560 SPTBP11277 2137 aa12.05□□□□□ -0.48
HDAC8-204ENST00000373560 A0A1W2PQJ5 194 aa12.04□□□□□ -0.48
HDAC8-204ENST00000373560 TRIM49BA6NDI0 452 aa12.04□□□□□ -0.48
HDAC8-204ENST00000373560 BECN2A8MW95 431 aa12.04□□□□□ -0.48
HDAC8-204ENST00000373560 TOX3O15405 576 aaPredicted RBP12.04□□□□□ -0.48
HDAC8-204ENST00000373560 DDX3YO15523 660 aaKnown RBP12.04□□□□□ -0.48
HDAC8-204ENST00000373560 DNAJC6O75061 913 aa12.04□□□□□ -0.48
HDAC8-204ENST00000373560 CPNE3O75131 537 aaKnown RBP12.04□□□□□ -0.48
HDAC8-204ENST00000373560 ALOX12BO75342 701 aa12.04□□□□□ -0.48
HDAC8-204ENST00000373560 LRIG2O94898 1065 aa12.04□□□□□ -0.48
HDAC8-204ENST00000373560 ACP5P13686 325 aa12.04□□□□□ -0.48
HDAC8-204ENST00000373560 OTX2P32243 289 aa12.04□□□□□ -0.48
HDAC8-204ENST00000373560 TSFMP43897 325 aaKnown RBP12.04□□□□□ -0.48
HDAC8-204ENST00000373560 PMS1P54277 932 aaKnown RBP12.04□□□□□ -0.48
HDAC8-204ENST00000373560 RRADP55042 308 aa12.04□□□□□ -0.48
HDAC8-204ENST00000373560 OTUD4Q01804 1114 aaKnown RBP12.04□□□□□ -0.48
HDAC8-204ENST00000373560 GPR19Q15760 415 aa12.04□□□□□ -0.48
HDAC8-204ENST00000373560 INO80DQ53TQ3 878 aaPredicted RBP12.04□□□□□ -0.48
HDAC8-204ENST00000373560 PLEKHS1Q5SXH7 462 aa12.04□□□□□ -0.48
HDAC8-204ENST00000373560 TMEM198Q66K66 360 aa12.04□□□□□ -0.48
HDAC8-204ENST00000373560 TSPAN33Q86UF1 283 aa12.04□□□□□ -0.48
HDAC8-204ENST00000373560 SH3KBP1Q96B97 665 aa12.04□□□□□ -0.48
HDAC8-204ENST00000373560 CXXC4Q9H2H0 198 aa12.04□□□□□ -0.48
HDAC8-204ENST00000373560 EPB41L1Q9H4G0 881 aa12.04□□□□□ -0.48
HDAC8-204ENST00000373560 STN1Q9H668 368 aaKnown RBP12.04□□□□□ -0.48
HDAC8-204ENST00000373560 PDFQ9HBH1 243 aa12.04□□□□□ -0.48
HDAC8-204ENST00000373560 PDE7BQ9NP56 450 aa12.04□□□□□ -0.48
HDAC8-204ENST00000373560 WASH6PQ9NQA3 447 aa12.04□□□□□ -0.48
HDAC8-204ENST00000373560 SUCOQ9UBS9 1254 aaKnown RBP12.04□□□□□ -0.48
HDAC8-204ENST00000373560 COL6A5A8TX70 2615 aa12.04□□□□□ -0.48
HDAC8-204ENST00000373560 J3KR12 359 aa12.03□□□□□ -0.48
HDAC8-204ENST00000373560 TRAFD1O14545 582 aaPredicted RBP12.03□□□□□ -0.48
HDAC8-204ENST00000373560 PCDH17O14917 1159 aa12.03□□□□□ -0.48
HDAC8-204ENST00000373560 CETN3O15182 167 aa12.03□□□□□ -0.48
HDAC8-204ENST00000373560 SCRG1O75711 98 aa12.03□□□□□ -0.48
HDAC8-204ENST00000373560 HEXIM1O94992 359 aaKnown RBP12.03□□□□□ -0.48
HDAC8-204ENST00000373560 ATP1A1P05023 1023 aaKnown RBP12.03□□□□□ -0.48
HDAC8-204ENST00000373560 F3P13726 295 aa12.03□□□□□ -0.48
HDAC8-204ENST00000373560 DNAJA1P31689 397 aaKnown RBP12.03□□□□□ -0.48
HDAC8-204ENST00000373560 PBX1P40424 430 aa12.03□□□□□ -0.48
HDAC8-204ENST00000373560 CAPZBP47756 277 aa12.03□□□□□ -0.48
HDAC8-204ENST00000373560 CSNK1G2P78368 415 aa12.03□□□□□ -0.48
HDAC8-204ENST00000373560 GCNT1Q02742 428 aa12.03□□□□□ -0.48
HDAC8-204ENST00000373560 ABRQ12979 859 aa12.03□□□□□ -0.48
HDAC8-204ENST00000373560 CDC16Q13042 620 aa12.03□□□□□ -0.48
HDAC8-204ENST00000373560 SLC25A52Q3SY17 297 aa12.03□□□□□ -0.48
HDAC8-204ENST00000373560 C2CD6Q53TS8 623 aa12.03□□□□□ -0.48
HDAC8-204ENST00000373560 ZNF324BQ6AW86 544 aaPredicted RBP12.03□□□□□ -0.48
HDAC8-204ENST00000373560 IRGCQ6NXR0 463 aa12.03□□□□□ -0.48
HDAC8-204ENST00000373560 GJB7Q6PEY0 223 aa12.03□□□□□ -0.48
HDAC8-204ENST00000373560 TMEM26Q6ZUK4 368 aa12.03□□□□□ -0.48
HDAC8-204ENST00000373560 DSELQ8IZU8 1212 aa12.03□□□□□ -0.48
HDAC8-204ENST00000373560 SIDT2Q8NBJ9 832 aaKnown RBP12.03□□□□□ -0.48
HDAC8-204ENST00000373560 ACBD4Q8NC06 268 aa12.03□□□□□ -0.48
HDAC8-204ENST00000373560 TSEN2Q8NCE0 465 aaKnown RBP12.03□□□□□ -0.48
HDAC8-204ENST00000373560 SNX21Q969T3 373 aa12.03□□□□□ -0.48
HDAC8-204ENST00000373560 MTFMTQ96DP5 389 aaKnown RBP12.03□□□□□ -0.48
HDAC8-204ENST00000373560 SLC41A2Q96JW4 573 aa12.03□□□□□ -0.48
HDAC8-204ENST00000373560 SMIM14Q96QK8 99 aa12.03□□□□□ -0.48
HDAC8-204ENST00000373560 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.03□□□□□ -0.48
HDAC8-204ENST00000373560 OLAHQ9NV23 265 aa12.03□□□□□ -0.48
HDAC8-204ENST00000373560 OR12D3Q9UGF7 316 aa12.03□□□□□ -0.48
HDAC8-204ENST00000373560 STAP1Q9ULZ2 295 aa12.03□□□□□ -0.48
HDAC8-204ENST00000373560 NPIPB15A6NHN6 443 aaPredicted RBP12.02□□□□□ -0.49
HDAC8-204ENST00000373560 MED7O43513 233 aa12.02□□□□□ -0.49
HDAC8-204ENST00000373560 ALPPP05187 535 aa12.02□□□□□ -0.49
HDAC8-204ENST00000373560 RAB40ALP0C0E4 278 aa12.02□□□□□ -0.49
HDAC8-204ENST00000373560 AMD1P17707 334 aa12.02□□□□□ -0.49
HDAC8-204ENST00000373560 SERPINA4P29622 427 aa12.02□□□□□ -0.49
HDAC8-204ENST00000373560 LRP8Q14114 963 aa12.02□□□□□ -0.49
HDAC8-204ENST00000373560 RABEP1Q15276 862 aa12.02□□□□□ -0.49
HDAC8-204ENST00000373560 PTCHD3Q3KNS1 767 aa12.02□□□□□ -0.49
HDAC8-204ENST00000373560 RPTNQ6XPR3 784 aa12.02□□□□□ -0.49
HDAC8-204ENST00000373560 SRLQ86TD4 932 aa12.02□□□□□ -0.49
HDAC8-204ENST00000373560 TMEM126BQ8IUX1 230 aa12.02□□□□□ -0.49
HDAC8-204ENST00000373560 PPP4R1Q8TF05 950 aa12.02□□□□□ -0.49
HDAC8-204ENST00000373560 CASKIN2Q8WXE0 1202 aa12.02□□□□□ -0.49
HDAC8-204ENST00000373560 SCAMP4Q969E2 229 aa12.02□□□□□ -0.49
HDAC8-204ENST00000373560 ZNF514Q96K75 400 aaPredicted RBP12.02□□□□□ -0.49
HDAC8-204ENST00000373560 CNDP1Q96KN2 507 aa12.02□□□□□ -0.49
HDAC8-204ENST00000373560 TUBGCP5Q96RT8 1024 aa12.02□□□□□ -0.49
HDAC8-204ENST00000373560 HERPUD2Q9BSE4 406 aa12.02□□□□□ -0.49
HDAC8-204ENST00000373560 NLNQ9BYT8 704 aa12.02□□□□□ -0.49
HDAC8-204ENST00000373560 TMEM63CQ9P1W3 806 aa12.02□□□□□ -0.49
HDAC8-204ENST00000373560 ZNF624Q9P2J8 865 aaPredicted RBP12.02□□□□□ -0.49
HDAC8-204ENST00000373560 UBA2Q9UBT2 640 aaPredicted RBP12.02□□□□□ -0.49
HDAC8-204ENST00000373560 PCDHA7Q9UN72 937 aa12.02□□□□□ -0.49
HDAC8-204ENST00000373560 KIR2DS5A0A0G2JLQ3 304 aa12.01□□□□□ -0.49
HDAC8-204ENST00000373560 A0A0G2JNG1 304 aa12.01□□□□□ -0.49
HDAC8-204ENST00000373560 KIR2DS3K7RE56 304 aa12.01□□□□□ -0.49
HDAC8-204ENST00000373560 MEN1O00255 615 aa12.01□□□□□ -0.49
HDAC8-204ENST00000373560 SLC16A3O15427 465 aaKnown RBP12.01□□□□□ -0.49
HDAC8-204ENST00000373560 WISP2O76076 250 aa12.01□□□□□ -0.49
HDAC8-204ENST00000373560 LCA5LO95447 670 aa12.01□□□□□ -0.49
HDAC8-204ENST00000373560 TEAD1P28347 426 aa12.01□□□□□ -0.49
HDAC8-204ENST00000373560 VIPR1P32241 457 aa12.01□□□□□ -0.49
HDAC8-204ENST00000373560 RORAP35398 523 aa12.01□□□□□ -0.49
HDAC8-204ENST00000373560 CA7P43166 264 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms