RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 NET1Q7Z628 596 aaPredicted RBP19.41■□□□□ 0.7
HDAC1-201ENST00000373548 RBFAQ8N0V3 343 aa19.41■□□□□ 0.7
HDAC1-201ENST00000373548 ZNF557Q8N988 423 aaPredicted RBP19.41■□□□□ 0.7
HDAC1-201ENST00000373548 CHST14Q8NCH0 376 aa19.41■□□□□ 0.7
HDAC1-201ENST00000373548 MCCC1Q96RQ3 725 aaPredicted RBP19.41■□□□□ 0.7
HDAC1-201ENST00000373548 MTIF3Q9H2K0 278 aaKnown RBP19.41■□□□□ 0.7
HDAC1-201ENST00000373548 DCLRE1BQ9H816 532 aa19.41■□□□□ 0.7
HDAC1-201ENST00000373548 ZBTB26Q9HCK0 441 aa19.41■□□□□ 0.7
HDAC1-201ENST00000373548 MARK1Q9P0L2 795 aa19.41■□□□□ 0.7
HDAC1-201ENST00000373548 PIKFYVEQ9Y2I7 2098 aa19.41■□□□□ 0.7
HDAC1-201ENST00000373548 PLXNB3Q9ULL4 1909 aa19.41■□□□□ 0.7
HDAC1-201ENST00000373548 GRXCR1A8MXD5 290 aa19.4■□□□□ 0.7
HDAC1-201ENST00000373548 LMNAP02545 664 aaKnown RBP19.4■□□□□ 0.7
HDAC1-201ENST00000373548 UGT2B4P06133 528 aa19.4■□□□□ 0.7
HDAC1-201ENST00000373548 ACRV1P26436 265 aa19.4■□□□□ 0.7
HDAC1-201ENST00000373548 HK3P52790 923 aa19.4■□□□□ 0.7
HDAC1-201ENST00000373548 EML3Q32P44 896 aa19.4■□□□□ 0.7
HDAC1-201ENST00000373548 FBXO48Q5FWF7 155 aa19.4■□□□□ 0.7
HDAC1-201ENST00000373548 LRRC66Q68CR7 880 aa19.4■□□□□ 0.7
HDAC1-201ENST00000373548 PTRHD1Q6GMV3 140 aaKnown RBP19.4■□□□□ 0.7
HDAC1-201ENST00000373548 USP45Q70EL2 814 aa19.4■□□□□ 0.7
HDAC1-201ENST00000373548 KIAA0907Q7Z7F0 614 aaPredicted RBP19.4■□□□□ 0.7
HDAC1-201ENST00000373548 CLYBLQ8N0X4 340 aa19.4■□□□□ 0.7
HDAC1-201ENST00000373548 NAT16Q8N8M0 369 aa19.4■□□□□ 0.7
HDAC1-201ENST00000373548 GPR26Q8NDV2 337 aa19.4■□□□□ 0.7
HDAC1-201ENST00000373548 RP9Q8TA86 221 aaKnown RBP19.4■□□□□ 0.7
HDAC1-201ENST00000373548 OTUB2Q96DC9 234 aa19.4■□□□□ 0.7
HDAC1-201ENST00000373548 EBF2Q9HAK2 575 aa19.4■□□□□ 0.7
HDAC1-201ENST00000373548 MID1IP1Q9NPA3 183 aa19.4■□□□□ 0.7
HDAC1-201ENST00000373548 NOP53Q9NZM5 478 aaKnown RBP19.4■□□□□ 0.7
HDAC1-201ENST00000373548 PRSS21Q9Y6M0 314 aa19.4■□□□□ 0.7
HDAC1-201ENST00000373548 CIB2O75838 187 aa19.4■□□□□ 0.7
HDAC1-201ENST00000373548 FGF4P08620 206 aa19.4■□□□□ 0.7
HDAC1-201ENST00000373548 RPS17P08708 135 aaKnown RBP19.4■□□□□ 0.7
HDAC1-201ENST00000373548 CHRM1P11229 460 aaPredicted RBP19.4■□□□□ 0.7
HDAC1-201ENST00000373548 HERC3Q15034 1050 aa19.4■□□□□ 0.7
HDAC1-201ENST00000373548 PPP1R3AQ16821 1122 aa19.4■□□□□ 0.7
HDAC1-201ENST00000373548 WLSQ5T9L3 541 aa19.4■□□□□ 0.7
HDAC1-201ENST00000373548 RBM23Q86U06 439 aaKnown RBP19.4■□□□□ 0.7
HDAC1-201ENST00000373548 TRPC4APQ8TEL6 797 aa19.4■□□□□ 0.7
HDAC1-201ENST00000373548 ZNF641Q96N77 438 aaPredicted RBP19.4■□□□□ 0.7
HDAC1-201ENST00000373548 PANX3Q96QZ0 392 aa19.4■□□□□ 0.7
HDAC1-201ENST00000373548 TTC1Q99614 292 aa19.4■□□□□ 0.7
HDAC1-201ENST00000373548 CIPCQ9C0C6 399 aa19.4■□□□□ 0.7
HDAC1-201ENST00000373548 MRPS23Q9Y3D9 190 aaKnown RBP19.4■□□□□ 0.7
HDAC1-201ENST00000373548 NUP210Q8TEM1 1887 aaPredicted RBP19.39■□□□□ 0.69
HDAC1-201ENST00000373548 NCF1BA6NI72 391 aaPredicted RBP19.39■□□□□ 0.69
HDAC1-201ENST00000373548 NCF1CA8MVU1 366 aaPredicted RBP19.39■□□□□ 0.69
HDAC1-201ENST00000373548 STX16-NPEPL1H3BU86 382 aa19.39■□□□□ 0.69
HDAC1-201ENST00000373548 STX16O14662 325 aa19.39■□□□□ 0.69
HDAC1-201ENST00000373548 ZNF197O14709 1029 aa19.39■□□□□ 0.69
HDAC1-201ENST00000373548 KRT36O76013 467 aa19.39■□□□□ 0.69
HDAC1-201ENST00000373548 ANP32DO95626 131 aa19.39■□□□□ 0.69
HDAC1-201ENST00000373548 NCF1P14598 390 aaPredicted RBP19.39■□□□□ 0.69
HDAC1-201ENST00000373548 EZRP15311 586 aaKnown RBP19.39■□□□□ 0.69
HDAC1-201ENST00000373548 LHCGRP22888 699 aa19.39■□□□□ 0.69
HDAC1-201ENST00000373548 CLCQ05315 142 aa19.39■□□□□ 0.69
HDAC1-201ENST00000373548 TRMT5Q32P41 509 aaKnown RBP19.39■□□□□ 0.69
HDAC1-201ENST00000373548 FAM109BQ6ICB4 259 aaPredicted RBP19.39■□□□□ 0.69
HDAC1-201ENST00000373548 RIPOR1Q6ZS17 1223 aa19.39■□□□□ 0.69
HDAC1-201ENST00000373548 DEFB107AQ8IZN7 70 aa19.39■□□□□ 0.69
HDAC1-201ENST00000373548 CLDN19Q8N6F1 224 aa19.39■□□□□ 0.69
HDAC1-201ENST00000373548 OR2A12Q8NGT7 310 aa19.39■□□□□ 0.69
HDAC1-201ENST00000373548 ITFG1Q8TB96 612 aa19.39■□□□□ 0.69
HDAC1-201ENST00000373548 LKAAEAR1Q8TD35 194 aa19.39■□□□□ 0.69
HDAC1-201ENST00000373548 PDLIM5Q96HC4 596 aaKnown RBP19.39■□□□□ 0.69
HDAC1-201ENST00000373548 LRRC3BQ96PB8 259 aa19.39■□□□□ 0.69
HDAC1-201ENST00000373548 C1QTNF3Q9BXJ4 246 aa19.39■□□□□ 0.69
HDAC1-201ENST00000373548 ZMYM5Q9UJ78 669 aa19.39■□□□□ 0.69
HDAC1-201ENST00000373548 CRLS1Q9UJA2 301 aa19.39■□□□□ 0.69
HDAC1-201ENST00000373548 GNPTGQ9UJJ9 305 aa19.39■□□□□ 0.69
HDAC1-201ENST00000373548 ERVW-1Q9UQF0 538 aa19.39■□□□□ 0.69
HDAC1-201ENST00000373548 GNAZP19086 355 aa19.39■□□□□ 0.69
HDAC1-201ENST00000373548 AGTR2P50052 363 aa19.39■□□□□ 0.69
HDAC1-201ENST00000373548 PTSQ03393 145 aa19.39■□□□□ 0.69
HDAC1-201ENST00000373548 CYLC2Q14093 348 aaPredicted RBP19.39■□□□□ 0.69
HDAC1-201ENST00000373548 GPR33Q49SQ1 333 aa19.39■□□□□ 0.69
HDAC1-201ENST00000373548 PREPLQ4J6C6 727 aaPredicted RBP19.39■□□□□ 0.69
HDAC1-201ENST00000373548 LYPLAL1Q5VWZ2 237 aa19.39■□□□□ 0.69
HDAC1-201ENST00000373548 ANKS6Q68DC2 871 aa19.39■□□□□ 0.69
HDAC1-201ENST00000373548 PGM2L1Q6PCE3 622 aa19.39■□□□□ 0.69
HDAC1-201ENST00000373548 GPSM1Q86YR5 675 aa19.39■□□□□ 0.69
HDAC1-201ENST00000373548 AHI1Q8N157 1196 aa19.39■□□□□ 0.69
HDAC1-201ENST00000373548 DNAJC15Q9Y5T4 150 aa19.39■□□□□ 0.69
HDAC1-201ENST00000373548 GOLGA8CPA6NN73 597 aa19.38■□□□□ 0.69
HDAC1-201ENST00000373548 AGAP14A8MT82 685 aa19.38■□□□□ 0.69
HDAC1-201ENST00000373548 PSMG1O95456 288 aa19.38■□□□□ 0.69
HDAC1-201ENST00000373548 CA3P07451 260 aa19.38■□□□□ 0.69
HDAC1-201ENST00000373548 POU2F2P09086 479 aa19.38■□□□□ 0.69
HDAC1-201ENST00000373548 ITGB6P18564 788 aa19.38■□□□□ 0.69
HDAC1-201ENST00000373548 PTPN5P54829 565 aa19.38■□□□□ 0.69
HDAC1-201ENST00000373548 FOXA1P55317 472 aa19.38■□□□□ 0.69
HDAC1-201ENST00000373548 LCP2Q13094 533 aa19.38■□□□□ 0.69
HDAC1-201ENST00000373548 GEN1Q17RS7 908 aa19.38■□□□□ 0.69
HDAC1-201ENST00000373548 KANK2Q63ZY3 851 aa19.38■□□□□ 0.69
HDAC1-201ENST00000373548 ADGRD2Q7Z7M1 963 aa19.38■□□□□ 0.69
HDAC1-201ENST00000373548 NXPE1Q8N323 547 aa19.38■□□□□ 0.69
HDAC1-201ENST00000373548 SORCS1Q8WY21 1168 aa19.38■□□□□ 0.69
HDAC1-201ENST00000373548 C19orf60Q96EN9 201 aa19.38■□□□□ 0.69
HDAC1-201ENST00000373548 ASIC4Q96FT7 647 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms