RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 ZNF470Q6ECI4 717 aa7□□□□□ -1.29
CSMD2-206ENST00000373388 MFSD8Q8NHS3 518 aa7□□□□□ -1.29
CSMD2-206ENST00000373388 ZNF597Q96LX8 424 aa7□□□□□ -1.29
CSMD2-206ENST00000373388 PELOQ9BRX2 385 aaKnown RBP7□□□□□ -1.29
CSMD2-206ENST00000373388 SLC38A7Q9NVC3 462 aa7□□□□□ -1.29
CSMD2-206ENST00000373388 FKBP7Q9Y680 259 aa7□□□□□ -1.29
CSMD2-206ENST00000373388 CHD2O14647 1828 aaKnown RBP7□□□□□ -1.29
CSMD2-206ENST00000373388 A8MUI8 341 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 FABP3P05413 133 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 BMP3P12645 472 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 KELP23276 732 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 DDX6P26196 483 aaKnown RBP eCLIP6.99□□□□□ -1.29
CSMD2-206ENST00000373388 NIPAL4Q0D2K0 466 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 ABRQ12979 859 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 C16orf46Q6P387 395 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 NUDT18Q6ZVK8 323 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 ZBTB46Q86UZ6 589 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 PAQR7Q86WK9 346 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 SLC19A2O60779 497 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 HIST1H2ABP04908 130 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 SERPIND1P05546 499 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 UQCRC1P31930 480 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 EN1Q05925 392 aaPredicted RBP6.99□□□□□ -1.29
CSMD2-206ENST00000373388 SLC22A10Q63ZE4 541 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 SPOCD1Q6ZMY3 1216 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 HIST3H2AQ7L7L0 130 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 HIST1H2ACQ93077 130 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 TMEM45AQ9NWC5 275 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 MAT2BQ9NZL9 334 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 AGAP5A6NIR3 686 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 TBX10O75333 385 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 CYP2A7P20853 494 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 CRHR1P34998 444 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 CRTC2Q53ET0 693 aaPredicted RBP6.99□□□□□ -1.29
CSMD2-206ENST00000373388 CPNE9Q8IYJ1 553 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 STAG3L4Q8TBR4 150 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 ZFP57Q9NU63 452 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 MKS1Q9NXB0 559 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 CEP152O94986 1710 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 FUOMA2VDF0 154 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 TLR1Q15399 786 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 CHRDL2Q6WN34 429 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 TDRPQ86YL5 185 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 NKAPQ8N5F7 415 aaKnown RBP6.99□□□□□ -1.29
CSMD2-206ENST00000373388 SLC4A11Q8NBS3 891 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 RUSC1Q9BVN2 902 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 TFR2Q9UP52 801 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 CDC42BPAQ5VT25 1732 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 CACNA1IQ9P0X4 2223 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 CCNYL3P0C7X3 344 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 CSH1P0DML2 217 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 CSH2P0DML3 217 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 GRIA4P48058 902 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 FXR2P51116 673 aaKnown RBP eCLIP6.99□□□□□ -1.29
CSMD2-206ENST00000373388 TGFBIQ15582 683 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 DPP9Q86TI2 863 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 ITPAQ9BY32 194 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 ZNF696Q9H7X3 374 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 XPNPEP1Q9NQW7 623 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 STUB1Q9UNE7 303 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 SHBGP04278 402 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 DNASE1P24855 282 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 VEGFCP49767 419 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 GPAT2Q6NUI2 795 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 ALYREFQ86V81 257 aaKnown RBP6.99□□□□□ -1.29
CSMD2-206ENST00000373388 GALNT11Q8NCW6 608 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 C12orf65Q9H3J6 166 aaKnown RBP6.99□□□□□ -1.29
CSMD2-206ENST00000373388 POMPQ9Y244 141 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 NEDD8-MDP1E9PL57 170 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 PAHP00439 452 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 HMGN1P05114 100 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 NCK1P16333 377 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 MC2RQ01718 297 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 CACNB2Q08289 660 aaPredicted RBP6.99□□□□□ -1.29
CSMD2-206ENST00000373388 GTF2IRD2BQ6EKJ0 949 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 GTF2H5Q6ZYL4 71 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 LINGO2Q7L985 606 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 GTF2IRD2Q86UP8 949 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 SLC35F3Q8IY50 421 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 OR10T2Q8NGX3 314 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 NXPE2Q96DL1 559 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 ARPC5LQ9BPX5 153 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 VPS25Q9BRG1 176 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 ZNF700Q9H0M5 742 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 TESMINQ9Y4I5 508 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 CPSF4O95639 269 aaKnown RBP6.99□□□□□ -1.29
CSMD2-206ENST00000373388 HLA-DPB1P04440 258 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 FAM182BQ5T319 152 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 FAM20CQ8IXL6 584 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 PSKH2Q96QS6 385 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 GAD1Q99259 594 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 CYP7B1O75881 506 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 HK1P19367 917 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 RAB3AP20336 220 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 CDK8P49336 464 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 RAB8AP61006 207 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 MBTD1Q05BQ5 628 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 BMPR2Q13873 1038 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 PTGR1Q14914 329 aa6.99□□□□□ -1.29
CSMD2-206ENST00000373388 SEC23AQ15436 765 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms