RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 ZC3H12AQ5D1E8 599 aaKnown RBP13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 INTS11Q5TA45 600 aaKnown RBP13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 N4BP2L1Q5TBK1 243 aaPredicted RBP13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 C9orf57Q5W0N0 161 aa13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 GLT6D1Q7Z4J2 308 aa13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 OR14K1Q8NGZ2 314 aa13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 ZNF75CPQ92670 426 aaPredicted RBP13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 EXOC2Q96KP1 924 aa13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 PRKD2Q9BZL6 878 aa13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 A8MX80 341 aa13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 UGT2B11O75310 529 aa13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 APODP05090 189 aa13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 ITGA2BP08514 1039 aa13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 LBX1P52954 281 aa13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 KCNJ2P63252 427 aa13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 TGM3Q08188 693 aa13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 CREG2Q8IUH2 290 aa13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 ZNF431Q8TF32 576 aaPredicted RBP13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 FATE1Q969F0 183 aa13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 TMEM159Q96B96 161 aa13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 RETREG1Q9H6L5 497 aa13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 PTCH2Q9Y6C5 1203 aa13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 B8ZZF3 427 aa13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 CCNG1P51959 295 aa13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 SMAD3P84022 425 aaKnown RBP13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 DUSP4Q13115 394 aa13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 DLG2Q15700 870 aa13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 MREGQ8N565 214 aa13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 FAM47BQ8NA70 645 aa13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 ADCY4Q8NFM4 1077 aa13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 WNT8BQ93098 351 aa13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 FAM136AQ96C01 138 aa13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 C1GALT1C1Q96EU7 318 aa13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 QPCTLQ9NXS2 382 aa13.98□□□□□ -0.17
RAPGEF1-202ENST00000372190 DISC1C4P0D8 188 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 H0YJX3 145 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 PDE2AO00408 941 aaPredicted RBP13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 TRDMT1O14717 391 aaKnown RBP13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 CLPXO76031 633 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 RAB4AP20338 218 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 MMP13P45452 471 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 PITPNAQ00169 270 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 FAM187BQ17R55 369 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 WDR59Q6PJI9 974 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 PTAR1Q7Z6K3 402 aaPredicted RBP13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 FNDC5Q8NAU1 212 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 ASB15Q8WXK1 588 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 SEC14L1Q92503 715 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 SLC35C1Q96A29 364 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 VCPIP1Q96JH7 1222 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 TSNAXQ99598 290 aaKnown RBP13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 PEAK1Q9H792 1746 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 FGF10O15520 208 aaPredicted RBP13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 HOXB6P17509 224 aaKnown RBP13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 ZNF135P52742 658 aaPredicted RBP13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 CBWD6Q4V339 395 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 CBWD3Q5JTY5 395 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 CBWD5Q5RIA9 395 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 PIGKQ92643 395 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 RHBDF1Q96CC6 855 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 SERAC1Q96JX3 654 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 CEP295NLQ96MC4 621 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 CREBZFQ9NS37 354 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 ZNF142P52746 1687 aaPredicted RBP13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 OIP5O43482 229 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 PPP1R11O60927 126 aaPredicted RBP13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 PSKH1P11801 424 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 PEPDP12955 493 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 CBLBQ13191 982 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 SPPL2BQ8TCT7 592 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 TRUB2O95900 331 aaKnown RBP13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 GRTP1Q5TC63 336 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 FAM46CQ5VWP2 391 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 LRRC52Q8N7C0 313 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 TBC1D15Q8TC07 691 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 TCEAL4Q96EI5 215 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 CD93Q9NPY3 652 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 CCDC167Q9P0B6 97 aa13.97□□□□□ -0.17
RAPGEF1-202ENST00000372190 CYP7B1O75881 506 aa13.96□□□□□ -0.17
RAPGEF1-202ENST00000372190 OR56A5P0C7T3 313 aa13.96□□□□□ -0.17
RAPGEF1-202ENST00000372190 TUBG1P23258 451 aa13.96□□□□□ -0.17
RAPGEF1-202ENST00000372190 PIK3CBP42338 1070 aa13.96□□□□□ -0.17
RAPGEF1-202ENST00000372190 RPL6Q02878 288 aaKnown RBP13.96□□□□□ -0.17
RAPGEF1-202ENST00000372190 PLEKHG6Q3KR16 790 aa13.96□□□□□ -0.17
RAPGEF1-202ENST00000372190 POM121L1PQ3SYA9 428 aa13.96□□□□□ -0.17
RAPGEF1-202ENST00000372190 SH3D19Q5HYK7 790 aa13.96□□□□□ -0.17
RAPGEF1-202ENST00000372190 GTF2IRD2BQ6EKJ0 949 aa13.96□□□□□ -0.17
RAPGEF1-202ENST00000372190 GTF2IRD2Q86UP8 949 aa13.96□□□□□ -0.17
RAPGEF1-202ENST00000372190 CEP41Q9BYV8 373 aa13.96□□□□□ -0.17
RAPGEF1-202ENST00000372190 PAK6Q9NQU5 681 aaPredicted RBP13.96□□□□□ -0.17
RAPGEF1-202ENST00000372190 NDOR1Q9UHB4 597 aa13.96□□□□□ -0.17
RAPGEF1-202ENST00000372190 A0A087X0B3 334 aa13.96□□□□□ -0.17
RAPGEF1-202ENST00000372190 POLR1CO15160 346 aaPredicted RBP13.96□□□□□ -0.17
RAPGEF1-202ENST00000372190 TGM6O95932 706 aa13.96□□□□□ -0.17
RAPGEF1-202ENST00000372190 IL1BP01584 269 aa13.96□□□□□ -0.17
RAPGEF1-202ENST00000372190 GADD45AP24522 165 aa13.96□□□□□ -0.17
RAPGEF1-202ENST00000372190 PSMA1P25786 263 aaKnown RBP13.96□□□□□ -0.17
RAPGEF1-202ENST00000372190 BIKQ13323 160 aa13.96□□□□□ -0.17
RAPGEF1-202ENST00000372190 SNAPC1Q16533 368 aa13.96□□□□□ -0.17
RAPGEF1-202ENST00000372190 P2RY8Q86VZ1 359 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms