RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 RTL3Q8N8U3 475 aaKnown RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 TMEM74Q96NL1 305 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 FCRL3Q96P31 734 aaPredicted RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 BBS4Q96RK4 519 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 SLC25A51Q9H1U9 297 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 MMADHCQ9H3L0 296 aaPredicted RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 SOX17Q9H6I2 414 aaPredicted RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 COQ10BQ9H8M1 238 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 USP29Q9HBJ7 922 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 IMP3Q9NV31 184 aaKnown RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 OSER1Q9NX31 292 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 FADS3Q9Y5Q0 445 aa9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 CFAP20Q9Y6A4 193 aaKnown RBP9.05□□□□□ -0.96
SMARCA1-202ENST00000371122 hCG_2039718K7EN88 272 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 ACSL4O60488 711 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 RPP40O75818 363 aaKnown RBP9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 UQCRBP14927 111 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 LIPEQ05469 1076 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 TMEM132CQ8N3T6 1108 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 FIBCD1Q8N539 461 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 FBXO22Q8NEZ5 403 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 OR2T12Q8NG77 320 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 TUBGCP5Q96RT8 1024 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 SH3GL1Q99961 368 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 MRPL9Q9BYD2 267 aaKnown RBP9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 BCO2Q9BYV7 579 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 BRD9Q9H8M2 597 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 REEP1Q9H902 201 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 MARCH7Q9H992 704 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 PALMDQ9NP74 551 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 TOR4AQ9NXH8 423 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 SLC9A8Q9Y2E8 581 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 GMFGO60234 142 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 ITGB1P05556 798 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 RHOQP17081 205 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 FEN1P39748 380 aaKnown RBP9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 ADARP55265 1226 aaKnown RBP9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 DLG1Q12959 904 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 PCBP2Q15366 365 aaKnown RBP eCLIP9.04□□□□□ -0.964e-7■■□□□ 12.1
SMARCA1-202ENST00000371122 ANGPT1Q15389 498 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 SWT1Q5T5J6 900 aaKnown RBP9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 C6orf89Q6UWU4 347 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 TDRPQ86YL5 185 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 VANGL1Q8TAA9 524 aaPredicted RBP9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 CANT1Q8WVQ1 401 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 MYO19Q96H55 970 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 ABCB10Q9NRK6 738 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 RAPGEFL1Q9UHV5 662 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 HS3ST4Q9Y661 456 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 AURKAO14965 403 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 SEPT4O43236 478 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 CNOT3O75175 753 aaKnown RBP9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 RECQL5O94762 991 aaPredicted RBP9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 HAPLN1P10915 354 aaPredicted RBP9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 CCNCP24863 283 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 RRM2P31350 389 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 GRK3P35626 688 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 RPIAP49247 311 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 NAB1Q13506 487 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 FAM174BQ3ZCQ3 159 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 OGFOD2Q6N063 350 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 SERPINA9Q86WD7 417 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 HIPK1Q86Z02 1210 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 CRYBG2Q8N1P7 616 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 CPSF7Q8N684 471 aaKnown RBP9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 ZNF540Q8NDQ6 660 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 SPPL2BQ8TCT7 592 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 PLEKHG4BQ96PX9 1271 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 TMEM245Q9H330 911 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 GIMAP4Q9NUV9 329 aa9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 CDV3Q9UKY7 258 aaKnown RBP9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 MRPS7Q9Y2R9 242 aaKnown RBP9.04□□□□□ -0.96
SMARCA1-202ENST00000371122 AHCTF1Q8WYP5 2266 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 A0A087WXM4 84 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 TRIM43BA6NCK2 446 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 E7ENX8 843 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 ALDOAP04075 364 aaKnown RBP9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 PTNP21246 168 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 MAP3K10Q02779 954 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 HNRNPDQ14103 355 aaKnown RBP9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 PABPC1LQ4VXU2 614 aaKnown RBP9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 ARMC6Q6NXE6 501 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 TMC5Q6UXY8 1006 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 ZYG11AQ6WRX3 759 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 ZC3H3Q8IXZ2 948 aaKnown RBP9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 FAM110BQ8TC76 370 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 ARMC5Q96C12 935 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 PTCD3Q96EY7 689 aaKnown RBP9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 ZNF570Q96NI8 536 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 SMIM14Q96QK8 99 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 EPB41L1Q9H4G0 881 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 MRGBPQ9NV56 204 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 NDOR1Q9UHB4 597 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 SORCS3Q9UPU3 1222 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 TRAV19A0A0A6YYK7 116 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 RFPL1O75677 317 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 MYCLP1P12525 358 aaPredicted RBP9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 TSHRP16473 764 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 MAPK1P28482 360 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 RPL5P46777 297 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms