RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 PHACTR4Q8IZ21 702 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 KRT78Q8N1N4 520 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 GALNT15Q8N3T1 639 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 NAT16Q8N8M0 369 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 PYDC1Q8WXC3 89 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 EZH1Q92800 747 aaPredicted RBP5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 AARSD1Q9BTE6 412 aaKnown RBP5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 MUC13Q9H3R2 512 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 ATAD3AQ9NVI7 634 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 NLE1Q9NVX2 485 aaPredicted RBP5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 ZNF358Q9NW07 568 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 TAS2R1Q9NYW7 299 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 POLR2AP24928 1970 aaKnown RBP5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 A0A0J9YYE9 177 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 PDZK1P1A8MUH7 402 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 UBXN8O00124 270 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 INPPL1O15357 1258 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 DLX3O60479 287 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 SNAP91O60641 907 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 STC2O76061 302 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 RECQL5O94762 991 aaPredicted RBP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 SOX11P35716 441 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 AFF1P51825 1210 aaKnown RBP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 RAD23AP54725 363 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 OLIG2Q13516 323 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 TP53BP2Q13625 1128 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 TSNQ15631 228 aaKnown RBP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 SLC44A4Q53GD3 710 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 VWA5B1Q5TIE3 1220 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 TTC33Q6PID6 262 aaPredicted RBP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 RANBP10Q6VN20 620 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 EGFL6Q8IUX8 553 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 RAVER1Q8IY67 606 aaKnown RBP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 CPNE9Q8IYJ1 553 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 DSELQ8IZU8 1212 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 ZSCAN18Q8TBC5 510 aaPredicted RBP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 AUTS2Q8WXX7 1259 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 THAP11Q96EK4 314 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 FCRL3Q96P31 734 aaPredicted RBP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 CASD1Q96PB1 797 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 LENG8Q96PV6 779 aaPredicted RBP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 CADM1Q9BY67 442 aaKnown RBP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 TDP1Q9NUW8 608 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 ANAPC2Q9UJX6 822 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 RIMKLBQ9ULI2 386 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 DOLKQ9UPQ8 538 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 SPACA6W5XKT8 324 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 SIPA1L1O43166 1804 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 LCHNA4D1U4 455 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 A8MT66 165 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 WDR47O94967 919 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 GJB5O95377 273 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 CPSF4O95639 269 aaKnown RBP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 DLDP09622 509 aaKnown RBP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 AOC1P19801 751 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 CHI3L1P36222 383 aaPredicted RBP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 GNPDA1P46926 289 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 RPL38P63173 70 aaKnown RBP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 TMEM259Q4ZIN3 620 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 SLC8B1Q6J4K2 584 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 TLDC1Q6P9B6 456 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 RBM23Q86U06 439 aaKnown RBP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 CAMK1DQ8IU85 385 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 PHYKPLQ8IUZ5 450 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 TCEAL8Q8IYN2 117 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 AHI1Q8N157 1196 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 ANKLE1Q8NAG6 615 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 KHSRPQ92945 711 aaKnown RBP eCLIP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 ROPN1LQ96C74 230 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 AP2M1Q96CW1 435 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 TUBGCP5Q96RT8 1024 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 RAD9AQ99638 391 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 DERL2Q9GZP9 239 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 CCDC90BQ9GZT6 254 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 ADNPQ9H2P0 1102 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 COPS7BQ9H9Q2 264 aaPredicted RBP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 SLC28A3Q9HAS3 691 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 TLR9Q9NR96 1032 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 DNAJC11Q9NVH1 559 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 SH3BP4Q9P0V3 963 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 VPS51Q9UID3 782 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 CDH22Q9UJ99 828 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 V9GYQ6 96 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 OR51F1A6NGY5 319 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 FFAR3O14843 346 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 GPR42O15529 346 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 DNAJA2O60884 412 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 GUCY1B2O75343 617 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 SEC24DO94855 1032 aaPredicted RBP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 EPN2O95208 641 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 APODP05090 189 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 CHRM1P11229 460 aaPredicted RBP5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 ZNF30P17039 623 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 RPIAP49247 311 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 USP46P62068 366 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 ATAT1Q5SQI0 421 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 LDLRAP1Q5SW96 308 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 ZNF697Q5TEC3 545 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 ZNF549Q6P9A3 640 aa5.27□□□□□ -1.57
SMNDC1-202ENST00000369603 FBXO46Q6PJ61 603 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 174.2 ms