RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 RPS24P62847 133 aaKnown RBP8.78□□□□□ -1
TPM3-213ENST00000368545 CDH17Q12864 832 aa8.78□□□□□ -1
TPM3-213ENST00000368545 RFTN1Q14699 578 aaPredicted RBP8.78□□□□□ -1
TPM3-213ENST00000368545 MLF2Q15773 248 aaPredicted RBP8.78□□□□□ -1
TPM3-213ENST00000368545 STEAP4Q687X5 459 aa8.78□□□□□ -1
TPM3-213ENST00000368545 ESRP1Q6NXG1 681 aaKnown RBP8.78□□□□□ -1
TPM3-213ENST00000368545 ZNF449Q6P9G9 518 aa8.78□□□□□ -1
TPM3-213ENST00000368545 HTR3DQ70Z44 454 aa8.78□□□□□ -1
TPM3-213ENST00000368545 IGDCC3Q8IVU1 814 aa8.78□□□□□ -1
TPM3-213ENST00000368545 CCDC117Q8IWD4 279 aaPredicted RBP8.78□□□□□ -1
TPM3-213ENST00000368545 CFAP52Q8N1V2 620 aa8.78□□□□□ -1
TPM3-213ENST00000368545 CPXM2Q8N436 756 aa8.78□□□□□ -1
TPM3-213ENST00000368545 DNAAF3Q8N9W5 541 aa8.78□□□□□ -1
TPM3-213ENST00000368545 MYEOVQ96EZ4 313 aa8.78□□□□□ -1
TPM3-213ENST00000368545 CFAP36Q96G28 342 aa8.78□□□□□ -1
TPM3-213ENST00000368545 MYADMQ96S97 322 aa8.78□□□□□ -1
TPM3-213ENST00000368545 CYP2S1Q96SQ9 504 aa8.78□□□□□ -1
TPM3-213ENST00000368545 MLPHQ9BV36 600 aaPredicted RBP8.78□□□□□ -1
TPM3-213ENST00000368545 FSD1LQ9BXM9 530 aa8.78□□□□□ -1
TPM3-213ENST00000368545 IL22Q9GZX6 179 aa8.78□□□□□ -1
TPM3-213ENST00000368545 SLC25A51Q9H1U9 297 aa8.78□□□□□ -1
TPM3-213ENST00000368545 BFARQ9NZS9 450 aa8.78□□□□□ -1
TPM3-213ENST00000368545 SENP1Q9P0U3 644 aa8.78□□□□□ -1
TPM3-213ENST00000368545 ARHGAP26Q9UNA1 814 aa8.78□□□□□ -1
TPM3-213ENST00000368545 GTF2A1LQ9UNN4 478 aa8.78□□□□□ -1
TPM3-213ENST00000368545 IKBKGQ9Y6K9 419 aa8.78□□□□□ -1
TPM3-213ENST00000368545 C1QTNF9BB2RNN3 333 aa8.78□□□□□ -1
TPM3-213ENST00000368545 POC1B-GALNT4F8VUJ3 575 aa8.78□□□□□ -1
TPM3-213ENST00000368545 J3KR12 359 aa8.78□□□□□ -1
TPM3-213ENST00000368545 LEFTY1O75610 366 aa8.78□□□□□ -1
TPM3-213ENST00000368545 C1QTNF9P0C862 333 aa8.78□□□□□ -1
TPM3-213ENST00000368545 EPCAMP16422 314 aa8.78□□□□□ -1
TPM3-213ENST00000368545 PRKCHP24723 683 aa8.78□□□□□ -1
TPM3-213ENST00000368545 AVPR1AP37288 418 aa8.78□□□□□ -1
TPM3-213ENST00000368545 GRIA1P42261 906 aa8.78□□□□□ -1
TPM3-213ENST00000368545 NPY2RP49146 381 aa8.78□□□□□ -1
TPM3-213ENST00000368545 LSAMPQ13449 338 aa8.78□□□□□ -1
TPM3-213ENST00000368545 FAM182AQ5T1J6 154 aa8.78□□□□□ -1
TPM3-213ENST00000368545 MPP7Q5T2T1 576 aa8.78□□□□□ -1
TPM3-213ENST00000368545 CASC4Q6P4E1 433 aa8.78□□□□□ -1
TPM3-213ENST00000368545 IGF2-ASQ6U949 168 aa8.78□□□□□ -1
TPM3-213ENST00000368545 LURAP1LQ8IV03 231 aa8.78□□□□□ -1
TPM3-213ENST00000368545 OXNAD1Q96HP4 312 aaPredicted RBP8.78□□□□□ -1
TPM3-213ENST00000368545 ZNF419Q96HQ0 510 aaPredicted RBP8.78□□□□□ -1
TPM3-213ENST00000368545 PAFAH2Q99487 392 aa8.78□□□□□ -1
TPM3-213ENST00000368545 TBL1YQ9BQ87 522 aa8.78□□□□□ -1
TPM3-213ENST00000368545 DUSP23Q9BVJ7 150 aa8.78□□□□□ -1
TPM3-213ENST00000368545 POLR1EQ9GZS1 481 aaKnown RBP8.78□□□□□ -1
TPM3-213ENST00000368545 PDFQ9HBH1 243 aa8.78□□□□□ -1
TPM3-213ENST00000368545 RALYQ9UKM9 306 aaKnown RBP8.78□□□□□ -1
TPM3-213ENST00000368545 CA14Q9ULX7 337 aa8.78□□□□□ -1
TPM3-213ENST00000368545 NOTCH4Q99466 2003 aa8.78□□□□□ -1
TPM3-213ENST00000368545 MAGEB16A2A368 324 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 ZNF197O14709 1029 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 KDELR3O43731 214 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 TBL1XO60907 577 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 POLBP06746 335 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 RHOP08100 348 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 CEACAM1P13688 526 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 MGAT1P26572 445 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 HOXD9P28356 352 aaPredicted RBP8.77□□□□□ -1.01
TPM3-213ENST00000368545 GCAP28676 217 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 BCL6P41182 706 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 MSH2P43246 934 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 MTNR1BP49286 362 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 SGSHP51688 502 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 OXCT1P55809 520 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 SESN2P58004 480 aaPredicted RBP8.77□□□□□ -1.01
TPM3-213ENST00000368545 RAC1P63000 192 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 NAB1Q13506 487 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 FRG1Q14331 258 aaKnown RBP8.77□□□□□ -1.01
TPM3-213ENST00000368545 ZNF235Q14590 738 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 TMED2Q15363 201 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 SLC14A2Q15849 920 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 SKIDA1Q1XH10 827 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 TOR2AQ5JU69 321 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 SEZ6L2Q6UXD5 910 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 FRMD7Q6ZUT3 714 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 PTRH1Q86Y79 214 aaKnown RBP8.77□□□□□ -1.01
TPM3-213ENST00000368545 CMTM8Q8IZV2 173 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 MPP5Q8N3R9 675 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 OR52K1Q8NGK4 314 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 SHKBP1Q8TBC3 707 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 WBP2Q969T9 261 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 IMP4Q96G21 291 aaKnown RBP8.77□□□□□ -1.01
TPM3-213ENST00000368545 CCDC138Q96M89 665 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 TASP1Q9H6P5 420 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 ATP13A1Q9HD20 1204 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 NT5MQ9NPB1 228 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 LTB4R2Q9NPC1 389 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 HCFC1R1Q9NWW0 138 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 CFAP97Q9P2B7 532 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 DNMT3BQ9UBC3 853 aaKnown RBP8.77□□□□□ -1.01
TPM3-213ENST00000368545 CTNNAL1Q9UBT7 734 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 TUBD1Q9UJT1 453 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 POLHQ9Y253 713 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 GPR45Q9Y5Y3 372 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 IQANK1A0A1B0GTG1 560 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 LEFTY2O00292 366 aa8.77□□□□□ -1.01
TPM3-213ENST00000368545 SHOX2O60902 331 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms