RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 ZNF648Q5T619 568 aaPredicted RBP15.81■□□□□ 0.12
CKS1B-202ENST00000368436 PDPK2PQ6A1A2 396 aa15.81■□□□□ 0.12
CKS1B-202ENST00000368436 TIPARPQ7Z3E1 657 aaKnown RBP15.81■□□□□ 0.12
CKS1B-202ENST00000368436 ADGRG6Q86SQ4 1221 aa15.81■□□□□ 0.12
CKS1B-202ENST00000368436 NT5DC3Q86UY8 548 aa15.81■□□□□ 0.12
CKS1B-202ENST00000368436 PHYKPLQ8IUZ5 450 aa15.81■□□□□ 0.12
CKS1B-202ENST00000368436 TRAM1L1Q8N609 369 aa15.81■□□□□ 0.12
CKS1B-202ENST00000368436 GLYATL1Q969I3 302 aa15.81■□□□□ 0.12
CKS1B-202ENST00000368436 CATSPER2Q96P56 530 aa15.81■□□□□ 0.12
CKS1B-202ENST00000368436 OLFM3Q96PB7 478 aa15.81■□□□□ 0.12
CKS1B-202ENST00000368436 CTRCQ99895 268 aa15.81■□□□□ 0.12
CKS1B-202ENST00000368436 SPATA16Q9BXB7 569 aa15.81■□□□□ 0.12
CKS1B-202ENST00000368436 TRIM4Q9C037 500 aa15.81■□□□□ 0.12
CKS1B-202ENST00000368436 XPO4Q9C0E2 1151 aaKnown RBP15.81■□□□□ 0.12
CKS1B-202ENST00000368436 SLC25A51Q9H1U9 297 aa15.81■□□□□ 0.12
CKS1B-202ENST00000368436 OR2AG1Q9H205 316 aa15.81■□□□□ 0.12
CKS1B-202ENST00000368436 RAD18Q9NS91 495 aa15.81■□□□□ 0.12
CKS1B-202ENST00000368436 KLC4Q9NSK0 619 aa15.81■□□□□ 0.12
CKS1B-202ENST00000368436 LOC101059948A0A1B0GTJ6 334 aa15.8■□□□□ 0.12
CKS1B-202ENST00000368436 SSU72P8A0A1W2PR75 194 aa15.8■□□□□ 0.12
CKS1B-202ENST00000368436 PRR19A6NJB7 356 aa15.8■□□□□ 0.12
CKS1B-202ENST00000368436 APOL1O14791 398 aa15.8■□□□□ 0.12
CKS1B-202ENST00000368436 C9P02748 559 aa15.8■□□□□ 0.12
CKS1B-202ENST00000368436 ANKRD34CP0C6C1 535 aa15.8■□□□□ 0.12
CKS1B-202ENST00000368436 ARHGAP25P42331 645 aa15.8■□□□□ 0.12
CKS1B-202ENST00000368436 MAPK9P45984 424 aa15.8■□□□□ 0.12
CKS1B-202ENST00000368436 POLE2P56282 527 aa15.8■□□□□ 0.12
CKS1B-202ENST00000368436 PDK1Q15118 436 aa15.8■□□□□ 0.12
CKS1B-202ENST00000368436 FAM182AQ5T1J6 154 aa15.8■□□□□ 0.12
CKS1B-202ENST00000368436 ALS2CLQ60I27 953 aa15.8■□□□□ 0.12
CKS1B-202ENST00000368436 PLXDC1Q8IUK5 500 aa15.8■□□□□ 0.12
CKS1B-202ENST00000368436 OR8K1Q8NGG5 319 aa15.8■□□□□ 0.12
CKS1B-202ENST00000368436 SLC35G2Q8TBE7 412 aa15.8■□□□□ 0.12
CKS1B-202ENST00000368436 AGAP3Q96P47 875 aa15.8■□□□□ 0.12
CKS1B-202ENST00000368436 DNAJC7Q99615 494 aa15.8■□□□□ 0.12
CKS1B-202ENST00000368436 CEP41Q9BYV8 373 aa15.8■□□□□ 0.12
CKS1B-202ENST00000368436 BRD8Q9H0E9 1235 aa15.8■□□□□ 0.12
CKS1B-202ENST00000368436 APMAPQ9HDC9 416 aa15.8■□□□□ 0.12
CKS1B-202ENST00000368436 ARFGAP3Q9NP61 516 aa15.8■□□□□ 0.12
CKS1B-202ENST00000368436 SIDT1Q9NXL6 827 aaKnown RBP15.8■□□□□ 0.12
CKS1B-202ENST00000368436 OGFRQ9NZT2 677 aa15.8■□□□□ 0.12
CKS1B-202ENST00000368436 SCHIP1Q9P0W5 487 aaPredicted RBP15.8■□□□□ 0.12
CKS1B-202ENST00000368436 ZNF624Q9P2J8 865 aaPredicted RBP15.8■□□□□ 0.12
CKS1B-202ENST00000368436 SLC23A2Q9UGH3 650 aa15.8■□□□□ 0.12
CKS1B-202ENST00000368436 TUBD1Q9UJT1 453 aa15.8■□□□□ 0.12
CKS1B-202ENST00000368436 SHOC2Q9UQ13 582 aa15.8■□□□□ 0.12
CKS1B-202ENST00000368436 ZNF711Q9Y462 761 aa15.8■□□□□ 0.12
CKS1B-202ENST00000368436 PPP1R12AO14974 1030 aaPredicted RBP15.79■□□□□ 0.12
CKS1B-202ENST00000368436 KMOO15229 486 aa15.79■□□□□ 0.12
CKS1B-202ENST00000368436 NKX2-8O15522 239 aa15.79■□□□□ 0.12
CKS1B-202ENST00000368436 STK17BO94768 372 aa15.79■□□□□ 0.12
CKS1B-202ENST00000368436 MTA2O94776 668 aa15.79■□□□□ 0.12
CKS1B-202ENST00000368436 DLGAP3O95886 979 aa15.79■□□□□ 0.12
CKS1B-202ENST00000368436 PIRTP0C851 137 aa15.79■□□□□ 0.12
CKS1B-202ENST00000368436 ZFXP17010 805 aaPredicted RBP15.79■□□□□ 0.12
CKS1B-202ENST00000368436 BPIP17213 487 aa15.79■□□□□ 0.12
CKS1B-202ENST00000368436 SLC19A1P41440 591 aa15.79■□□□□ 0.12
CKS1B-202ENST00000368436 CCR10P46092 362 aa15.79■□□□□ 0.12
CKS1B-202ENST00000368436 CDK18Q07002 472 aa15.79■□□□□ 0.12
CKS1B-202ENST00000368436 ABHD18Q0P651 414 aa15.79■□□□□ 0.12
CKS1B-202ENST00000368436 KCNAB2Q13303 367 aa15.79■□□□□ 0.12
CKS1B-202ENST00000368436 LRRC38Q5VT99 294 aa15.79■□□□□ 0.12
CKS1B-202ENST00000368436 NPNTQ6UXI9 565 aa15.79■□□□□ 0.12
CKS1B-202ENST00000368436 TMEM26Q6ZUK4 368 aa15.79■□□□□ 0.12
CKS1B-202ENST00000368436 KDELC2Q7Z4H8 507 aa15.79■□□□□ 0.12
CKS1B-202ENST00000368436 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.79■□□□□ 0.12
CKS1B-202ENST00000368436 EFHD1Q9BUP0 239 aa15.79■□□□□ 0.12
CKS1B-202ENST00000368436 MAK16Q9BXY0 300 aaKnown RBP15.79■□□□□ 0.12
CKS1B-202ENST00000368436 TRIT1Q9H3H1 467 aaKnown RBP15.79■□□□□ 0.12
CKS1B-202ENST00000368436 GPN2Q9H9Y4 310 aaPredicted RBP15.79■□□□□ 0.12
CKS1B-202ENST00000368436 KLHL3Q9UH77 587 aa15.79■□□□□ 0.12
CKS1B-202ENST00000368436 SPTA1P02549 2419 aa15.78■□□□□ 0.12
CKS1B-202ENST00000368436 POLR1CO15160 346 aaPredicted RBP15.78■□□□□ 0.12
CKS1B-202ENST00000368436 VEGFDO43915 354 aa15.78■□□□□ 0.12
CKS1B-202ENST00000368436 NDST3O95803 873 aa15.78■□□□□ 0.12
CKS1B-202ENST00000368436 TPM3P06753 285 aa15.78■□□□□ 0.12
CKS1B-202ENST00000368436 ZNF7P17097 686 aaPredicted RBP15.78■□□□□ 0.12
CKS1B-202ENST00000368436 MAP7Q14244 749 aa15.78■□□□□ 0.12
CKS1B-202ENST00000368436 PCSK7Q16549 785 aa15.78■□□□□ 0.12
CKS1B-202ENST00000368436 TEX44Q53QW1 395 aa15.78■□□□□ 0.12
CKS1B-202ENST00000368436 CRTC3Q6UUV7 619 aa15.78■□□□□ 0.12
CKS1B-202ENST00000368436 ABRAXAS1Q6UWZ7 409 aa15.78■□□□□ 0.12
CKS1B-202ENST00000368436 LRRTM4Q86VH4 590 aa15.78■□□□□ 0.12
CKS1B-202ENST00000368436 ZNF547Q8IVP9 402 aa15.78■□□□□ 0.12
CKS1B-202ENST00000368436 RHOT2Q8IXI1 618 aa15.78■□□□□ 0.12
CKS1B-202ENST00000368436 SPATA22Q8NHS9 363 aa15.78■□□□□ 0.12
CKS1B-202ENST00000368436 KIAA1143Q96AT1 154 aaPredicted RBP15.78■□□□□ 0.12
CKS1B-202ENST00000368436 C9orf72Q96LT7 481 aa15.78■□□□□ 0.12
CKS1B-202ENST00000368436 VPS35Q96QK1 796 aa15.78■□□□□ 0.12
CKS1B-202ENST00000368436 SRPK1Q96SB4 655 aaKnown RBP15.78■□□□□ 0.12
CKS1B-202ENST00000368436 TIMM29Q9BSF4 260 aa15.78■□□□□ 0.12
CKS1B-202ENST00000368436 GPR63Q9BZJ6 419 aa15.78■□□□□ 0.12
CKS1B-202ENST00000368436 OSGEPL1Q9H4B0 414 aa15.78■□□□□ 0.12
CKS1B-202ENST00000368436 DEF6Q9H4E7 631 aa15.78■□□□□ 0.12
CKS1B-202ENST00000368436 GLOD4Q9HC38 313 aa15.78■□□□□ 0.12
CKS1B-202ENST00000368436 TMPRSS11EQ9UL52 423 aa15.78■□□□□ 0.12
CKS1B-202ENST00000368436 SPO11Q9Y5K1 396 aa15.78■□□□□ 0.12
CKS1B-202ENST00000368436 SLC30A1Q9Y6M5 507 aa15.78■□□□□ 0.12
CKS1B-202ENST00000368436 UBR5O95071 2799 aaPredicted RBP15.78■□□□□ 0.12
CKS1B-202ENST00000368436 TOX3O15405 576 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms