RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 CD9P21926 228 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 XPAP23025 273 aaPredicted RBP9.41□□□□□ -0.9
VTA1-201ENST00000367621 RPS3P23396 243 aaKnown RBP eCLIP9.41□□□□□ -0.9
VTA1-201ENST00000367621 ACRV1P26436 265 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 FMO4P31512 558 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 PTGER3P43115 390 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 CCT5P48643 541 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 TTPAP49638 278 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 SEC24CP53992 1094 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 ILF2Q12905 390 aaKnown RBP9.41□□□□□ -0.9
VTA1-201ENST00000367621 FZD5Q13467 585 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 ARHGEF7Q14155 803 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 E2F5Q15329 346 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 AARS2Q5JTZ9 985 aaKnown RBP9.41□□□□□ -0.9
VTA1-201ENST00000367621 RNF187Q5TA31 235 aaPredicted RBP9.41□□□□□ -0.9
VTA1-201ENST00000367621 FAM46CQ5VWP2 391 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 ZDHHC20Q5W0Z9 365 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 CES4AQ5XG92 561 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 FAM45BPQ6NSW5 357 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 ERAP2Q6P179 960 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 FBXL19Q6PCT2 694 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 CERS6Q6ZMG9 384 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 CYP2U1Q7Z449 544 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 PIM3Q86V86 326 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 ADHFE1Q8IWW8 467 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 RAVER1Q8IY67 606 aaKnown RBP9.41□□□□□ -0.9
VTA1-201ENST00000367621 NRSN1Q8IZ57 195 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 PELI3Q8N2H9 469 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 SPATA6LQ8N4H0 392 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 GIMAP7Q8NHV1 300 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 GABPB2Q8TAK5 448 aaPredicted RBP9.41□□□□□ -0.9
VTA1-201ENST00000367621 GDAP1Q8TB36 358 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 FAM45AQ8TCE6 357 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 NAT14Q8WUY8 206 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 KCTD4Q8WVF5 259 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 ANKRD49Q8WVL7 239 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 FAM3CQ92520 227 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 FUBP1Q96AE4 644 aaKnown RBP9.41□□□□□ -0.9
VTA1-201ENST00000367621 DTD2Q96FN9 168 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 MSANTD3Q96H12 275 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 PPP1R16AQ96I34 528 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 CABS1Q96KC9 395 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 SLC30A3Q99726 388 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 WRAP53Q9BUR4 548 aaKnown RBP9.41□□□□□ -0.9
VTA1-201ENST00000367621 RIOK2Q9BVS4 552 aaKnown RBP9.41□□□□□ -0.9
VTA1-201ENST00000367621 SLC6A17Q9H1V8 727 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 FAM83DQ9H4H8 585 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 PKD2L2Q9NZM6 624 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 CD84Q9UIB8 345 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 CNOT6Q9ULM6 557 aaKnown RBP9.41□□□□□ -0.9
VTA1-201ENST00000367621 ANKRD6Q9Y2G4 727 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 OAS3Q9Y6K5 1087 aaKnown RBP9.41□□□□□ -0.9
VTA1-201ENST00000367621 F5P12259 2224 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 PRUNE2Q8WUY3 3088 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 KRBA1A5PL33 1030 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 A6NNZ2 444 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 FADS2P1A8MWK0 482 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 G3V2L1 256 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 AP1G1O43747 822 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 SGTAO43765 313 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 MMP20O60882 483 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 GLRA3O75311 464 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 RECQL5O94762 991 aaPredicted RBP9.4□□□□□ -0.9
VTA1-201ENST00000367621 KLHL2O95198 593 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 CHRNB1P11230 501 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 COL6A2P12110 1019 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 C6P13671 934 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 C5AR1P21730 350 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 DRD4P21917 467 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 NFKBIAP25963 317 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 SERPINB4P48594 390 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 GABPB1Q06547 395 aaPredicted RBP9.4□□□□□ -0.9
VTA1-201ENST00000367621 ELP6Q0PNE2 266 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 ITIH4Q14624 930 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 MLF2Q15773 248 aaPredicted RBP9.4□□□□□ -0.9
VTA1-201ENST00000367621 TUBB8Q3ZCM7 444 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 LINC01559Q495D7 138 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 KHDC1Q4VXA5 237 aaKnown RBP9.4□□□□□ -0.9
VTA1-201ENST00000367621 GPRC6AQ5T6X5 926 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 LYPLAL1Q5VWZ2 237 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 ZNF776Q68DI1 518 aaPredicted RBP9.4□□□□□ -0.9
VTA1-201ENST00000367621 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.4□□□□□ -0.9
VTA1-201ENST00000367621 KYAT3Q6YP21 454 aaKnown RBP9.4□□□□□ -0.9
VTA1-201ENST00000367621 RGS9BPQ6ZS82 235 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 ZNF765Q7L2R6 523 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 HDDC3Q8N4P3 179 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 TRAM1L1Q8N609 369 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 ARMC2Q8NEN0 867 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 OR6Y1Q8NGX8 325 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 MAFAQ8NHW3 353 aaPredicted RBP9.4□□□□□ -0.9
VTA1-201ENST00000367621 LKAAEAR1Q8TD35 194 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 HEXDCQ8WVB3 486 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 RAB7BQ96AH8 199 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 NXNL1Q96CM4 212 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 MAGEB18Q96M61 343 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 CDK15Q96Q40 435 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 CDH19Q9H159 772 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 POPDC3Q9HBV1 291 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 RAD18Q9NS91 495 aa9.4□□□□□ -0.9
VTA1-201ENST00000367621 SMOXQ9NWM0 555 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms