RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 GPR63Q9BZJ6 419 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 OR2AG1Q9H205 316 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 ARFGAP3Q9NP61 516 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 KCNK4Q9NYG8 393 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 FOXJ2Q9P0K8 574 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 TMEM9Q9P0T7 183 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 SLC23A2Q9UGH3 650 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 KCNK6Q9Y257 313 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 EFR3BQ9Y2G0 817 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 PCDHA3Q9Y5H8 950 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 DUSP10Q9Y6W6 482 aa13.51□□□□□ -0.25
TNFRSF1A-202ENST00000366159 KIR2DS5A0A0G2JLQ3 304 aa13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 A0A0G2JNG1 304 aa13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 SOWAHDA6NJG2 315 aa13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 APOC4-APOC2K7ER74 178 aa13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 KIR2DS3K7RE56 304 aa13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 APOC2P02655 101 aa13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 LIPCP11150 499 aa13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 ACP5P13686 325 aa13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 F3P13726 295 aa13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 CYLC1P35663 651 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 HHEXQ03014 270 aa13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 KIR2DS5Q14953 304 aa13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 NOMO1Q15155 1222 aa13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 SPA17Q15506 151 aa13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 SLC1A5Q15758 541 aa13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 KHDC1Q4VXA5 237 aaKnown RBP13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 SIRPB2Q5JXA9 342 aa13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 ALS2CLQ60I27 953 aa13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 WDR74Q6RFH5 385 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 RAD9BQ6WBX8 426 aa13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 C11orf96Q7Z7L8 435 aa13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 DAAM2Q86T65 1068 aa13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 JAMLQ86YT9 394 aa13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 TMTC1Q8IUR5 882 aa13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 ZNF547Q8IVP9 402 aa13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 TRABDQ9H4I3 376 aa13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 IL17CQ9P0M4 197 aa13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 TRHDEQ9UKU6 1024 aa13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 PCDHGA3Q9Y5H0 932 aa13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 HELZ2Q9BYK8 2649 aaKnown RBP13.5□□□□□ -0.25
TNFRSF1A-202ENST00000366159 OR5K4A6NMS3 321 aa13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 GAPDHSO14556 408 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 PJA2O43164 708 aa13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 VEGFDO43915 354 aa13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 XRCC1P18887 633 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 CD82P27701 267 aa13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 PTPN7P35236 360 aa13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 CHRNA4P43681 627 aa13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 UBE2IP63279 158 aaKnown RBP13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 SRSF6Q13247 344 aaKnown RBP13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 ATP13A5Q4VNC0 1218 aa13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 CCDC70Q6NSX1 233 aa13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 CCDC81Q6ZN84 652 aa13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 PID1Q7Z2X4 250 aa13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 ARHGAP22Q7Z5H3 698 aa13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 SLC9B2Q86UD5 537 aa13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 ZFAND4Q86XD8 727 aa13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 GAS2L3Q86XJ1 694 aa13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 ZNF761Q86XN6 746 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 PHYKPLQ8IUZ5 450 aa13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 BMPERQ8N8U9 685 aa13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 LRRC57Q8N9N7 239 aa13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 HAUS1Q96CS2 278 aa13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 SLC38A3Q99624 504 aa13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 HEMGNQ9BXL5 484 aa13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 LACRTQ9GZZ8 138 aa13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 UCK1Q9HA47 277 aa13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 IL26Q9NPH9 171 aa13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 PRDM8Q9NQV8 689 aa13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 KLC4Q9NSK0 619 aa13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 SCHIP1Q9P0W5 487 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 BSNQ9UPA5 3926 aa13.49□□□□□ -0.25
TNFRSF1A-202ENST00000366159 PIEZO2Q9H5I5 2752 aa13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 AGRPO00253 132 aa13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 KMOO15229 486 aa13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 MTX2O75431 263 aa13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 MPSTP25325 297 aa13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 CTNNA2P26232 953 aa13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 RBL1P28749 1068 aa13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 CA5AP35218 305 aa13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 MAPK10P53779 464 aa13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 EPHA4P54764 986 aa13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 MPP3Q13368 585 aa13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 MSLNQ13421 630 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 BIRC2Q13490 618 aa13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 TMEM139Q8IV31 216 aa13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 CCDC50Q8IVM0 306 aa13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 AGBL5Q8NDL9 886 aa13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 OR10G6Q8NH81 332 aa13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 ALG3Q92685 438 aa13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 PMEPA1Q969W9 287 aa13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 SH3KBP1Q96B97 665 aa13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 TAAR9Q96RI9 348 aa13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 TIMM29Q9BSF4 260 aa13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 SPRY4Q9C004 299 aa13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 C10orf88Q9H8K7 445 aa13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 BPIFA1Q9NP55 256 aa13.48□□□□□ -0.25
TNFRSF1A-202ENST00000366159 LUC7LQ9NQ29 371 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms