RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 CLEC14AQ86T13 490 aa13.08□□□□□ -0.32
SQSTM1-201ENST00000360718 ZNF781Q8N8C0 355 aa13.08□□□□□ -0.32
SQSTM1-201ENST00000360718 TERB1Q8NA31 727 aa13.08□□□□□ -0.32
SQSTM1-201ENST00000360718 OR13C4Q8NGS5 318 aa13.08□□□□□ -0.32
SQSTM1-201ENST00000360718 ZFAND2BQ8WV99 257 aa13.08□□□□□ -0.32
SQSTM1-201ENST00000360718 ATXN7L3BQ96GX2 97 aa13.08□□□□□ -0.32
SQSTM1-201ENST00000360718 CDX2Q99626 313 aaPredicted RBP13.08□□□□□ -0.32
SQSTM1-201ENST00000360718 HEPHQ9BQS7 1158 aa13.08□□□□□ -0.32
SQSTM1-201ENST00000360718 RHOJQ9H4E5 214 aa13.08□□□□□ -0.32
SQSTM1-201ENST00000360718 BRD9Q9H8M2 597 aa13.08□□□□□ -0.32
SQSTM1-201ENST00000360718 TCF7L2Q9NQB0 619 aa13.08□□□□□ -0.32
SQSTM1-201ENST00000360718 FBXO5Q9UKT4 447 aa13.08□□□□□ -0.32
SQSTM1-201ENST00000360718 PRPF19Q9UMS4 504 aaKnown RBP13.08□□□□□ -0.32
SQSTM1-201ENST00000360718 PKP3Q9Y446 797 aa13.08□□□□□ -0.32
SQSTM1-201ENST00000360718 ZNF711Q9Y462 761 aa13.08□□□□□ -0.32
SQSTM1-201ENST00000360718 A0A0J9YYE9 177 aa13.07□□□□□ -0.32
SQSTM1-201ENST00000360718 WASH3PC4AMC7 463 aa13.07□□□□□ -0.32
SQSTM1-201ENST00000360718 SLCO1B7G3V0H7 640 aa13.07□□□□□ -0.32
SQSTM1-201ENST00000360718 SLC22A2O15244 555 aa13.07□□□□□ -0.32
SQSTM1-201ENST00000360718 TRBC1P01850 177 aa13.07□□□□□ -0.32
SQSTM1-201ENST00000360718 ARRB2P32121 409 aa13.07□□□□□ -0.32
SQSTM1-201ENST00000360718 EIF2DP41214 584 aaKnown RBP13.07□□□□□ -0.32
SQSTM1-201ENST00000360718 ILF2Q12905 390 aaKnown RBP13.07□□□□□ -0.32
SQSTM1-201ENST00000360718 FNDC3BQ53EP0 1204 aaKnown RBP13.07□□□□□ -0.32
SQSTM1-201ENST00000360718 GDPD4Q6W3E5 623 aa13.07□□□□□ -0.32
SQSTM1-201ENST00000360718 SDCCAG8Q86SQ7 713 aaPredicted RBP13.07□□□□□ -0.32
SQSTM1-201ENST00000360718 DENND6AQ8IWF6 608 aa13.07□□□□□ -0.32
SQSTM1-201ENST00000360718 ST13P4Q8IZP2 240 aaPredicted RBP13.07□□□□□ -0.32
SQSTM1-201ENST00000360718 PLD6Q8N2A8 252 aaKnown RBP13.07□□□□□ -0.32
SQSTM1-201ENST00000360718 C2CD4AQ8NCU7 369 aaPredicted RBP13.07□□□□□ -0.32
SQSTM1-201ENST00000360718 OR4K2Q8NGD2 314 aa13.07□□□□□ -0.32
SQSTM1-201ENST00000360718 EID2BQ96D98 161 aa13.07□□□□□ -0.32
SQSTM1-201ENST00000360718 CDKN2AIPNLQ96HQ2 116 aa13.07□□□□□ -0.32
SQSTM1-201ENST00000360718 VPS39Q96JC1 886 aa13.07□□□□□ -0.32
SQSTM1-201ENST00000360718 SUDS3Q9H7L9 328 aaPredicted RBP13.07□□□□□ -0.32
SQSTM1-201ENST00000360718 UBE2ZQ9H832 354 aaPredicted RBP13.07□□□□□ -0.32
SQSTM1-201ENST00000360718 OXSMQ9NWU1 459 aa13.07□□□□□ -0.32
SQSTM1-201ENST00000360718 RAP2CQ9Y3L5 183 aa13.07□□□□□ -0.32
SQSTM1-201ENST00000360718 COL4A2P08572 1712 aa13.07□□□□□ -0.32
SQSTM1-201ENST00000360718 OR51F1A6NGY5 319 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 MBTPS2O43462 519 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 PEX1O43933 1283 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 PDE5AO76074 875 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 UGT2B4P06133 528 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 CTSLP07711 333 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 NFKBIAP25963 317 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 ADSLP30566 484 aaPredicted RBP13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 SLC1A2P43004 574 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 ABCG1P45844 678 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 MTTPP55157 894 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 ROR2Q01974 943 aaKnown RBP13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 SEMG2Q02383 582 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 ATG14Q6ZNE5 492 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 FRMD7Q6ZUT3 714 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 RAPH1Q70E73 1250 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 USP45Q70EL2 814 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 GALNT15Q8N3T1 639 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 KDM1BQ8NB78 822 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 OR4L1Q8NH43 312 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 GRIN3AQ8TCU5 1115 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 CSGALNACT1Q8TDX6 532 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 STON2Q8WXE9 905 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 LRIG1Q96JA1 1093 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 CENPKQ9BS16 269 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 MCMBPQ9BTE3 642 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 CATSPERZQ9NTU4 200 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 VTI1BQ9UEU0 232 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 CCDC162PA2VCL2 907 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 RGSL1A5PLK6 1076 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 E9PBE3 544 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 CD3EAPO15446 510 aaKnown RBP13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 KLHL41O60662 606 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 GOT2P00505 430 aaKnown RBP13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 AHSGP02765 367 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 HLA-EP13747 358 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 UQCRBP14927 111 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 CD151P48509 253 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 POLD2P49005 469 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 MPP1Q00013 466 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 THEMIS2Q5TEJ8 643 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 AFTPHQ6ULP2 937 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 ZC3HC1Q86WB0 502 aaKnown RBP13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 CILP2Q8IUL8 1156 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 RP9Q8TA86 221 aaKnown RBP13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 ECHDC3Q96DC8 303 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 GUCD1Q96NT3 240 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 SHCBP1LQ9BZQ2 653 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 ZFYVE1Q9HBF4 777 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 IL36AQ9UHA7 158 aa13.06□□□□□ -0.32
SQSTM1-201ENST00000360718 C1orf232A0A0U1RR37 186 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 CAPN8A6NHC0 703 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 CASQ2O14958 399 aaPredicted RBP13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 HDAC3O15379 428 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 APODP05090 189 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 ZCCHC18P0CG32 403 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 COL6A2P12110 1019 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 GABRB3P28472 473 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 HMGCLP35914 325 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 RPL14P50914 215 aaKnown RBP13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 PRKAA1Q13131 559 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms