RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 ERVK-7P63135 1459 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 ATP6V0D1P61421 351 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 GNA12Q03113 381 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 FSTL1Q12841 308 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 PTGR2Q8N8N7 351 aaPredicted RBP13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 ART4Q93070 314 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 DDX43Q9NXZ2 648 aaKnown RBP13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 ZNF70Q9UC06 446 aaPredicted RBP13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 ZNF69Q9UC07 566 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 SNCAIPQ9Y6H5 919 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 ITGB1P05556 798 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 MASP1P48740 699 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 FAM171A1Q5VUB5 890 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 NIPAL1Q6NVV3 410 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 SAMD14Q8IZD0 417 aaPredicted RBP13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 UBR7Q8N806 425 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 MSANTD3Q96H12 275 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 GRIN2DO15399 1336 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 A0A0J9YYE9 177 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 M0R129 80 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 KCNK1O00180 336 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 PGLSO95336 258 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 GLRA2P23416 452 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 PGDP52209 483 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 GIT2Q14161 759 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 GK5Q6ZS86 529 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 LINGO2Q7L985 606 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 PIWIL4Q7Z3Z4 852 aaKnown RBP13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 CCDC107Q8WV48 283 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 PMM1Q92871 262 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 IFT80Q9P2H3 777 aaPredicted RBP13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 C5orf51A6NDU8 294 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 CCNB1P14635 433 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 RBM34P42696 430 aaKnown RBP13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 BACE1P56817 501 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 SIM2Q14190 667 aaPredicted RBP13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 CDKL4Q5MAI5 379 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 ZNF366Q8N895 744 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 OR4A15Q8NGL6 344 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 CLP1Q92989 425 aaKnown RBP13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 PHB2Q99623 299 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 EBNA1BP2Q99848 306 aaKnown RBP13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 KLK14Q9P0G3 267 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 ZNHIT2Q9UHR6 403 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 ABHD14A-ACY1A0A1B0GW23 586 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 NARSO43776 548 aaKnown RBP13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 AKT2P31751 481 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 CASRP41180 1078 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 LIPEQ05469 1076 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 TEAD4Q15561 434 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 CERCAMQ5T4B2 595 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 PRAMEF17Q5VTA0 474 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 METTL7BQ6UX53 244 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 GPRIN3Q6ZVF9 776 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 TFAP2DQ7Z6R9 452 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 TRMOQ9BU70 441 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 PCBD2Q9H0N5 130 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 PAK6Q9NQU5 681 aaPredicted RBP13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 ZNF451Q9Y4E5 1061 aa13.13□□□□□ -0.31
SRGAP3-201ENST00000360413 RIC1Q4ADV7 1423 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 INO80Q9ULG1 1556 aaPredicted RBP13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 ATP6AP2A0A1C7CYW4 349 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 SLC33A1O00400 549 aaPredicted RBP13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 LYPLA1O75608 230 aaPredicted RBP13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 ATP6AP2O75787 350 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 PRAMEF1O95521 474 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 HNRNPLP14866 589 aaKnown RBP eCLIP13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 PVALBP20472 110 aaPredicted RBP13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 AMPD1P23109 780 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 FAM91A1Q658Y4 838 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 RBFAQ8N0V3 343 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 STOML3Q8TAV4 291 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 DENND1AQ8TEH3 1009 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 MARCH2Q9P0N8 246 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 MALT1Q9UDY8 824 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 LRATO95237 230 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 HSD3B1P14060 373 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 RAB10P61026 200 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 MAPK14Q16539 360 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 HSD17B12Q53GQ0 312 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 COLEC12Q5KU26 742 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 RAET1GQ6H3X3 334 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 SLC27A1Q6PCB7 646 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 CEP76Q8TAP6 659 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 AIF1LQ9BQI0 150 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 MOCS1Q9NZB8 636 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 A0A075B6Q4 140 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 TGDSO95455 350 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 ERBB2P04626 1255 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 TFPIP10646 304 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 TSHRP16473 764 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 RBL1P28749 1068 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 PNLIPRP1P54315 467 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 ANTXR2P58335 489 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 BNIP1Q12981 228 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 CEP170Q5SW79 1584 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 STXBP5Q5T5C0 1151 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 SLC22A16Q86VW1 577 aa13.12□□□□□ -0.31
SRGAP3-201ENST00000360413 ELMOD2Q8IZ81 293 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms