RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 HTR7P34969 479 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 CTSKP43235 329 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 ATP12AP54707 1039 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 OLIG2Q13516 323 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 CPTPQ5TA50 214 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 DENND5AQ6IQ26 1287 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 SEC14L1Q92503 715 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 OMA1Q96E52 524 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 C12orf42Q96LP6 360 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 Q96MT0 163 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 PDP1Q9P0J1 537 aaPredicted RBP13.63□□□□□ -0.23
VCP-201ENST00000358901 CORO2BQ9UQ03 480 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 ASF1AQ9Y294 204 aa13.63□□□□□ -0.23
VCP-201ENST00000358901 GLYATL1P3A0A0U1RQE8 302 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 H0Y858 1186 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 BCKDKO14874 412 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 SIX3O95343 332 aaPredicted RBP13.62□□□□□ -0.23
VCP-201ENST00000358901 H6PDO95479 791 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 UMPSP11172 480 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 TNNI3P19429 210 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 WARSP23381 471 aaKnown RBP13.62□□□□□ -0.23
VCP-201ENST00000358901 RPL3P39023 403 aaKnown RBP13.62□□□□□ -0.23
VCP-201ENST00000358901 TRAP1Q12931 704 aaKnown RBP13.62□□□□□ -0.23
VCP-201ENST00000358901 TAB1Q15750 504 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 GALNT18Q6P9A2 607 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 CLEC20AQ6ZU45 233 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 ZNF671Q8TAW3 534 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 POP5Q969H6 163 aaKnown RBP13.62□□□□□ -0.23
VCP-201ENST00000358901 FKBPLQ9UIM3 349 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 MED1Q15648 1581 aaPredicted RBP13.62□□□□□ -0.23
VCP-201ENST00000358901 LTN1O94822 1766 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 ARL5CA6NH57 179 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 TMEM233B4DJY2 109 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 TYROBPO43914 113 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 OR6B1O95007 311 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 PRAMEF1O95521 474 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 CXCR2P25025 360 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 ZNF438Q7Z4V0 828 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 AMIGO3Q86WK7 504 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 ZNF557Q8N988 423 aaPredicted RBP13.62□□□□□ -0.23
VCP-201ENST00000358901 CANT1Q8WVQ1 401 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 TRIM63Q969Q1 353 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 RBM4BQ9BQ04 359 aaKnown RBP13.62□□□□□ -0.23
VCP-201ENST00000358901 SLC39A3Q9BRY0 314 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 RBM4Q9BWF3 364 aaKnown RBP13.62□□□□□ -0.23
VCP-201ENST00000358901 RNF208Q9H0X6 261 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 QSOX1O00391 747 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 UGT2B4P06133 528 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 FESP07332 822 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 PPIBP23284 216 aaKnown RBP13.62□□□□□ -0.23
VCP-201ENST00000358901 RPIAP49247 311 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 POU5F1Q01860 360 aaKnown RBP13.62□□□□□ -0.23
VCP-201ENST00000358901 TRIM71Q2Q1W2 868 aaKnown RBP13.62□□□□□ -0.23
VCP-201ENST00000358901 DDI2Q5TDH0 399 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 OLFML1Q6UWY5 402 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 PPCDCQ96CD2 204 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 SIGLEC10Q96LC7 697 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 FCRL5Q96RD9 977 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 FANCEQ9HB96 536 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 KCTD5Q9NXV2 234 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 DPP7Q9UHL4 492 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 CNOT6Q9ULM6 557 aaKnown RBP13.62□□□□□ -0.23
VCP-201ENST00000358901 ZNF232Q9UNY5 417 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 MFHAS1Q9Y4C4 1052 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 ARIH1Q9Y4X5 557 aaPredicted RBP13.62□□□□□ -0.23
VCP-201ENST00000358901 KDM4FA0A1W2PPD8 638 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 DYRK3O43781 588 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 NBNO60934 754 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 XYLBO75191 536 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 GABRR2P28476 465 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 ECHS1P30084 290 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 SLC26A3P40879 764 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 FLT3LGP49771 235 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 SEPHS1P49903 392 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 SLC24A5Q71RS6 500 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 BRSK1Q8TDC3 778 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 WDR12Q9GZL7 423 aaKnown RBP13.62□□□□□ -0.23
VCP-201ENST00000358901 RNF39Q9H2S5 420 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 MUC13Q9H3R2 512 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 ASAH2Q9NR71 780 aa13.62□□□□□ -0.23
VCP-201ENST00000358901 TRMT13Q9NUP7 481 aaKnown RBP13.62□□□□□ -0.23
VCP-201ENST00000358901 TFECO14948 347 aaPredicted RBP13.61□□□□□ -0.23
VCP-201ENST00000358901 BMP10O95393 424 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 IL1BP01584 269 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 DLG1Q12959 904 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 SLC9A4Q6AI14 798 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 DEF8Q6ZN54 512 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 CRYBG2Q8N1P7 616 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 ASZ1Q8WWH4 475 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 HTRA1Q92743 480 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 NTAN1Q96AB6 310 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 EI24O14681 340 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 DLX3O60479 287 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 NR2F6P10588 404 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 AOC1P19801 751 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 MTPNP58546 118 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 ANXA8L1Q5VT79 327 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 HFE2Q6ZVN8 426 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 PTCHD4Q6ZW05 846 aa13.61□□□□□ -0.23
VCP-201ENST00000358901 R3HCC1LQ7Z5L2 792 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms