RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 HINT2Q9BX68 163 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 TMEM216Q9P0N5 145 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 A0A1B0GTH6 734 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 A0A1W2PQ67 120 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 TISP43B9A030 160 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 DHX15O43143 795 aaKnown RBP9.71□□□□□ -0.85
CHD3-202ENST00000358181 CBLP22681 906 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 SLC6A2P23975 617 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 CMPK1P30085 196 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 ARPC4P59998 168 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 CREB5Q02930 508 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 ARFRP1Q13795 201 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 CPSF6Q16630 551 aaKnown RBP eCLIP9.71□□□□□ -0.85
CHD3-202ENST00000358181 PCNX4Q63HM2 1172 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 CFAP206Q8IYR0 622 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 BHLHE22Q8NFJ8 381 aaPredicted RBP9.71□□□□□ -0.85
CHD3-202ENST00000358181 LMX1AQ8TE12 382 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 SOCS4Q8WXH5 440 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 ZBTB45Q96K62 511 aaPredicted RBP9.71□□□□□ -0.85
CHD3-202ENST00000358181 CCNL2Q96S94 520 aaPredicted RBP9.71□□□□□ -0.85
CHD3-202ENST00000358181 GAD1Q99259 594 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 PAFAH2Q99487 392 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 IRS2Q9Y4H2 1338 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 KCNK1O00180 336 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 PDCD5O14737 125 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 GRM6O15303 877 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 SCGB2A1O75556 95 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 WFS1O76024 890 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 RPL22P35268 128 aaKnown RBP9.71□□□□□ -0.86
CHD3-202ENST00000358181 MAZP56270 477 aaKnown RBP9.71□□□□□ -0.86
CHD3-202ENST00000358181 CCZ1BP86790 482 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 CCZ1P86791 482 aaPredicted RBP9.71□□□□□ -0.86
CHD3-202ENST00000358181 OXR1Q8N573 874 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 SMARCD2Q92925 531 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 PANX1Q96RD7 426 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 CITED4Q96RK1 184 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 SRMSQ9H3Y6 488 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 METTL7AQ9H8H3 244 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 ITSN1Q15811 1721 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 SERPINB7O75635 380 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 CYP11B2P19099 503 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 RPIAP49247 311 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 EEF1A2Q05639 463 aaKnown RBP9.71□□□□□ -0.86
CHD3-202ENST00000358181 TRIM28Q13263 835 aaKnown RBP9.71□□□□□ -0.86
CHD3-202ENST00000358181 DPYSQ14117 519 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 C2orf27AQ580R0 203 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 AGBL2Q5U5Z8 902 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 ARSKQ6UWY0 536 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 QSOX2Q6ZRP7 698 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 C8orf59Q8N0T1 100 aaPredicted RBP9.71□□□□□ -0.86
CHD3-202ENST00000358181 OR2L2Q8NH16 312 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 C1GALT1C1Q96EU7 318 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 OR51V1Q9H2C8 321 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 EXD2Q9NVH0 621 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 GDAP2Q9NXN4 497 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 RUVBL1Q9Y265 456 aaKnown RBP9.71□□□□□ -0.86
CHD3-202ENST00000358181 HGFP14210 728 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 ZC3H12AQ5D1E8 599 aaKnown RBP9.71□□□□□ -0.86
CHD3-202ENST00000358181 ZNF550Q7Z398 422 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 DEPDC4Q8N2C3 294 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 OR4K17Q8NGC6 315 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 AGO4Q9HCK5 861 aaKnown RBP9.71□□□□□ -0.86
CHD3-202ENST00000358181 ERVK-5Q9HDB9 667 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 OSGEPQ9NPF4 335 aa9.71□□□□□ -0.86
CHD3-202ENST00000358181 DDX4Q9NQI0 724 aaKnown RBP9.71□□□□□ -0.86
CHD3-202ENST00000358181 EIF2B3Q9NR50 452 aaKnown RBP9.71□□□□□ -0.86
CHD3-202ENST00000358181 POLR3BQ9NW08 1133 aaPredicted RBP9.71□□□□□ -0.86
CHD3-202ENST00000358181 POLR3HQ9Y535 204 aaPredicted RBP9.71□□□□□ -0.86
CHD3-202ENST00000358181 A0A1W2PPL8 197 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 A6NL46 340 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 A6NLC8 198 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 ARPC2O15144 300 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 MAGEC1O60732 1142 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 CHKAP35790 457 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 LSM12Q3MHD2 195 aaKnown RBP9.7□□□□□ -0.86
CHD3-202ENST00000358181 PTF1AQ7RTS3 328 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 LYSMD3Q7Z3D4 306 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 OR6Y1Q8NGX8 325 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 ZSWIM3Q96MP5 696 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 FN3KQ9H479 309 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 FAM105AQ9NUU6 356 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 ATPIF1Q9UII2 106 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 A0A087X1B8 175 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 M0R129 80 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 FADS2O95864 444 aaKnown RBP9.7□□□□□ -0.86
CHD3-202ENST00000358181 ITGB1P05556 798 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 TMEM253P0C7T8 217 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 SLC26A5P58743 744 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 SNAPC1Q16533 368 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 ANO7Q6IWH7 933 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 CCDC80Q76M96 950 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 NETO2Q8NC67 525 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 SLC40A1Q9NP59 571 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 C11orf16Q9NQ32 467 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 CIB4A0PJX0 185 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 PGRP06401 933 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 CD40LGP29965 261 aa9.7□□□□□ -0.86
CHD3-202ENST00000358181 ARCN1P48444 511 aaKnown RBP9.7□□□□□ -0.86
CHD3-202ENST00000358181 EARS2Q5JPH6 523 aaKnown RBP9.7□□□□□ -0.86
CHD3-202ENST00000358181 PRAMEF17Q5VTA0 474 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms