RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 CAPN1P07384 714 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 PKMP14618 531 aaKnown RBP8.2□□□□□ -1.1
CD46-205ENST00000358170 SLC2A4P14672 509 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 MZF1P28698 734 aaPredicted RBP8.2□□□□□ -1.1
CD46-205ENST00000358170 HSPA7P48741 367 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 GSK3BP49841 420 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 TPD52P55327 224 aaPredicted RBP8.2□□□□□ -1.1
CD46-205ENST00000358170 IL2P60568 153 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 LSAMPQ13449 338 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 FUT10Q6P4F1 479 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 RNF180Q86T96 592 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 CAMK1DQ8IU85 385 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 CMTR2Q8IYT2 770 aaKnown RBP8.2□□□□□ -1.1
CD46-205ENST00000358170 SNRNP27Q8WVK2 155 aaKnown RBP8.2□□□□□ -1.1
CD46-205ENST00000358170 AUTS2Q8WXX7 1259 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 FIG4Q92562 907 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 FUBP1Q96AE4 644 aaKnown RBP8.2□□□□□ -1.1
CD46-205ENST00000358170 STARD7Q9NQZ5 370 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 SMOXQ9NWM0 555 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 TMEM181Q9P2C4 612 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 CIDEBQ9UHD4 219 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 A0A1W2PQ67 120 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 CLGNO14967 610 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 CLOCKO15516 846 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 SLC22A3O75751 556 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 LPOP22079 712 aaPredicted RBP8.19□□□□□ -1.1
CD46-205ENST00000358170 NR4A1P22736 598 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 IST1P53990 364 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 RHOAP61586 193 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 HMGCS1Q01581 520 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 LRRC23Q53EV4 343 aaPredicted RBP8.19□□□□□ -1.1
CD46-205ENST00000358170 SLC44A4Q53GD3 710 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 ARTNQ5T4W7 220 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 SAPCD2Q86UD0 394 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 ZNF683Q8IZ20 524 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 B4GALNT2Q8NHY0 566 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 FBXO30Q8TB52 745 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 FEM1CQ96JP0 617 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 C8orf48Q96LL4 319 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 TCF12Q99081 682 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 MRPS26Q9BYN8 205 aaKnown RBP8.19□□□□□ -1.1
CD46-205ENST00000358170 ALG2Q9H553 416 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 PFDN4Q9NQP4 134 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 C2orf78A6NCI8 922 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 KRT87PA6NCN2 255 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 SLC38A8A6NNN8 435 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 TMX2-CTNND1H3BSU7 103 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 B4GAT1O43505 415 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 PAPSS2O95340 614 aaPredicted RBP8.19□□□□□ -1.1
CD46-205ENST00000358170 H6PDO95479 791 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 HOXD9P28356 352 aaPredicted RBP8.19□□□□□ -1.1
CD46-205ENST00000358170 HMOX2P30519 316 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 NR1H2P55055 460 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 TPGS1Q6ZTW0 290 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 GPRIN3Q6ZVF9 776 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 FAM126BQ8IXS8 530 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 AHI1Q8N157 1196 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 LRRC43Q8N309 656 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 OR2T11Q8NH01 316 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 GFM2Q969S9 779 aaKnown RBP8.19□□□□□ -1.1
CD46-205ENST00000358170 BOCQ9BWV1 1114 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 OSBPL11Q9BXB4 747 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 ADNPQ9H2P0 1102 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 NSUN3Q9H649 340 aaKnown RBP8.19□□□□□ -1.1
CD46-205ENST00000358170 CD300AQ9UGN4 299 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 DNMT3LQ9UJW3 386 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 POLR3HQ9Y535 204 aaPredicted RBP8.19□□□□□ -1.1
CD46-205ENST00000358170 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.19□□□□□ -1.1
CD46-205ENST00000358170 U3KQV3 271 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 TET1Q8NFU7 2136 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 ZSWIM8A7E2V4 1837 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 UPK3BL1B0FP48 263 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 UPK3BL2E5RIL1 263 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 PFDN1O60925 122 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 GSNP06396 782 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 SLC5A2P31639 672 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 HSPA13P48723 471 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 GALK1P51570 392 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 HK3P52790 923 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 OR4D2P58180 307 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 YBEYP58557 167 aaPredicted RBP8.19□□□□□ -1.1
CD46-205ENST00000358170 LAPTM5Q13571 262 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 PTGR1Q14914 329 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 ATP6AP1LQ52LC2 224 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 MBOAT1Q6ZNC8 495 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 STK32CQ86UX6 486 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 CLEC4FQ8N1N0 589 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 PCSK9Q8NBP7 692 aaKnown RBP8.19□□□□□ -1.1
CD46-205ENST00000358170 NCLNQ969V3 563 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 KIAA1191Q96A73 305 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 L3HYPDHQ96EM0 354 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 FUBP3Q96I24 572 aaKnown RBP eCLIP8.19□□□□□ -1.12e-6■■■■□ 19.7
CD46-205ENST00000358170 C17orf80Q9BSJ5 609 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 CIPCQ9C0C6 399 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 RNF38Q9H0F5 515 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 TNKS2Q9H2K2 1166 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 LTB4R2Q9NPC1 389 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.19□□□□□ -1.1
CD46-205ENST00000358170 PKP3Q9Y446 797 aa8.19□□□□□ -1.1
CD46-205ENST00000358170 TMEM88BA6NKF7 163 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms