RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 TTKP33981 857 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 PNPLA4P41247 253 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 NKX2-5P52952 324 aaPredicted RBP10.06□□□□□ -0.8
PTPRA-203ENST00000356147 TIAL1Q01085 375 aaKnown RBP eCLIP10.06□□□□□ -0.8
PTPRA-203ENST00000356147 RBBP7Q16576 425 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 C18orf21Q32NC0 220 aaPredicted RBP10.06□□□□□ -0.8
PTPRA-203ENST00000356147 PAGE2BQ5JRK9 111 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 C6orf183Q5T699 404 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 SPESP1Q6UW49 350 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 USP51Q70EK9 711 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 DEFB132Q7Z7B7 95 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 FRS2Q8WU20 508 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 TRUB1Q8WWH5 349 aaKnown RBP10.06□□□□□ -0.8
PTPRA-203ENST00000356147 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.06□□□□□ -0.8
PTPRA-203ENST00000356147 RHNO1Q9BSD3 238 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 BDH2Q9BUT1 245 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 MIOSQ9NXC5 875 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.06□□□□□ -0.8
PTPRA-203ENST00000356147 GNPTGQ9UJJ9 305 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 BAG5Q9UL15 447 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 PNMA8BQ9ULN7 279 aaPredicted RBP10.06□□□□□ -0.8
PTPRA-203ENST00000356147 CCDC162PA2VCL2 907 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 SOBPA7XYQ1 873 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 UPK1AO00322 258 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 SLC22A3O75751 556 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 CPNE6O95741 557 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 F9P00740 461 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 CYP4B1P13584 511 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 CRHBPP24387 322 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 BRCC3P46736 316 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 PIK3CGP48736 1102 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 SNX17Q15036 470 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 PTPRRQ15256 657 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 NKG7Q16617 165 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 SIRPB2Q5JXA9 342 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 PRMT9Q6P2P2 845 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 KDELC1Q6UW63 502 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 RAB44Q7Z6P3 723 aaPredicted RBP10.06□□□□□ -0.8
PTPRA-203ENST00000356147 GALNT5Q7Z7M9 940 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 SYVN1Q86TM6 617 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 SLCO6A1Q86UG4 719 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 FBXO39Q8N4B4 442 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 Q8N9G6 341 aaPredicted RBP10.06□□□□□ -0.8
PTPRA-203ENST00000356147 CNIH3Q8TBE1 160 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 PSMG2Q969U7 264 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 L3HYPDHQ96EM0 354 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 HMCESQ96FZ2 354 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 SH3YL1Q96HL8 342 aaPredicted RBP10.06□□□□□ -0.8
PTPRA-203ENST00000356147 TSGA13Q96PP4 275 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 ALPK1Q96QP1 1244 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 CORO1BQ9BR76 489 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 SARS2Q9NP81 518 aaKnown RBP10.06□□□□□ -0.8
PTPRA-203ENST00000356147 ZNF225Q9UK10 706 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 RNF112Q9ULX5 631 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 LTBP3Q9NS15 1303 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 PLXNA1Q9UIW2 1896 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 NPEPPSL1A6NEC2 478 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 F8W810 466 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 AP3B1O00203 1094 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 GNGT2O14610 69 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 ABCB7O75027 752 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 KATNA1O75449 491 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 MMP3P08254 477 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 SLC2A3P11169 496 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 ZNF37AP17032 561 aaPredicted RBP10.05□□□□□ -0.8
PTPRA-203ENST00000356147 MAP2K4P45985 399 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 ZFP36L2P47974 494 aaKnown RBP10.05□□□□□ -0.8
PTPRA-203ENST00000356147 CDKN1CP49918 316 aaPredicted RBP10.05□□□□□ -0.8
PTPRA-203ENST00000356147 POLR2JP52435 117 aaKnown RBP10.05□□□□□ -0.8
PTPRA-203ENST00000356147 VBP1P61758 197 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 DAG1Q14118 895 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 FSCN1Q16658 493 aaKnown RBP10.05□□□□□ -0.8
PTPRA-203ENST00000356147 GTF2IRD2BQ6EKJ0 949 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 THAP5Q7Z6K1 395 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 GTF2IRD2Q86UP8 949 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 TOP6BLQ8N6T0 577 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 NDNFQ8TB73 568 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 ITFG1Q8TB96 612 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 CALML6Q8TD86 181 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 STON2Q8WXE9 905 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 TRMOQ9BU70 441 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 AMBRA1Q9C0C7 1298 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 PAK1IP1Q9NWT1 392 aaPredicted RBP10.05□□□□□ -0.8
PTPRA-203ENST00000356147 WDR37Q9Y2I8 494 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 TSC2P49815 1807 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 GABRDO14764 452 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 GPR39O43194 453 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 HS6ST1O60243 411 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 OR4F21O95013 312 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 OXSR1O95747 527 aaPredicted RBP10.05□□□□□ -0.8
PTPRA-203ENST00000356147 ALPLP05186 524 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 SMIM10L2AP0DMW4 78 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 SMIM10L2BP0DMW5 78 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 FCGR1AP12314 374 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 IDO1P14902 403 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 HTR6P50406 440 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 TMBIM6P55061 237 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 CD47Q08722 323 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 KANK2Q63ZY3 851 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 C8orf59Q8N0T1 100 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms