RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 WNT9AO14904 365 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 ADAMTS4O75173 837 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 GSNP06396 782 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 TMED1Q13445 227 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 PEX6Q13608 980 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 COL9A2Q14055 689 aaPredicted RBP13.6□□□□□ -0.23
SMC6-201ENST00000351948 KIAA0930Q6ICG6 404 aaPredicted RBP13.6□□□□□ -0.23
SMC6-201ENST00000351948 ANO7Q6IWH7 933 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 BEND7Q8N7W2 519 aaPredicted RBP13.6□□□□□ -0.23
SMC6-201ENST00000351948 LEMD2Q8NC56 503 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 QRFPRQ96P65 431 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 OSBPL6Q9BZF3 934 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 PSME2Q9UL46 239 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 PHF24Q9UPV7 400 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 C16orf96A6NNT2 1141 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 GRXCR1A8MXD5 290 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 ANKRD66B4E2M5 251 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 NBNO60934 754 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 RFTN1Q14699 578 aaPredicted RBP13.6□□□□□ -0.23
SMC6-201ENST00000351948 PAFAH1B3Q15102 231 aaKnown RBP13.6□□□□□ -0.23
SMC6-201ENST00000351948 KIAA0408Q6ZU52 694 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 AHI1Q8N157 1196 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 TMCO5AQ8N6Q1 288 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 ZNF655Q8N720 491 aaPredicted RBP13.6□□□□□ -0.23
SMC6-201ENST00000351948 POLMQ9NP87 494 aaPredicted RBP13.6□□□□□ -0.23
SMC6-201ENST00000351948 FBXL12Q9NXK8 326 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 BLOC1S6Q9UL45 172 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 MRPS17Q9Y2R5 130 aaKnown RBP13.6□□□□□ -0.23
SMC6-201ENST00000351948 OR4F21O95013 312 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 BMPR1AP36894 532 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 PTGER3P43115 390 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 SH3BGRP55822 239 aaPredicted RBP13.6□□□□□ -0.23
SMC6-201ENST00000351948 PSME3P61289 254 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 MYLK3Q32MK0 819 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 GPR180Q86V85 440 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 ZNF781Q8N8C0 355 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 TSTD1Q8NFU3 115 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 GDPD5Q8WTR4 605 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 IRF7Q92985 503 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 OR52E6Q96RD3 313 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 GLDCP23378 1020 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 RPL10P27635 214 aaKnown RBP13.59□□□□□ -0.23
SMC6-201ENST00000351948 NSG1P42857 185 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 SQLEQ14534 574 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 PITRM1Q5JRX3 1037 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 PIK3R6Q5UE93 754 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 TRIM74Q86UV6 250 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 CYP4Z1Q86W10 505 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 CMTR2Q8IYT2 770 aaKnown RBP13.59□□□□□ -0.23
SMC6-201ENST00000351948 CD101Q93033 1021 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 LMLNQ96KR4 655 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 TBC1D10AQ9BXI6 508 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 SCN3BQ9NY72 215 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 AKAP7Q9P0M2 348 aaPredicted RBP13.59□□□□□ -0.23
SMC6-201ENST00000351948 GTF2A1LQ9UNN4 478 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 MAP1BP46821 2468 aaKnown RBP13.59□□□□□ -0.23
SMC6-201ENST00000351948 TOP3BO95985 862 aaKnown RBP13.59□□□□□ -0.23
SMC6-201ENST00000351948 ACTR1BP42025 376 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 GNPDA1P46926 289 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 ACTR1AP61163 376 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 CLCQ05315 142 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 SLC10A2Q12908 348 aaPredicted RBP13.59□□□□□ -0.23
SMC6-201ENST00000351948 KCNJ11Q14654 390 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 C22orf39Q6P5X5 142 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 HCFC1R1Q9NWW0 138 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 COQ6Q9Y2Z9 468 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 K7ERQ8 282 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 SIX3O95343 332 aaPredicted RBP13.59□□□□□ -0.23
SMC6-201ENST00000351948 ATP6V1G2O95670 118 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 ESR1P03372 595 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 PIK3R1P27986 724 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 CACNA2D1P54289 1103 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 SERINC3Q13530 473 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 LRRC66Q68CR7 880 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 ENPP7Q6UWV6 458 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 LCN9Q8WX39 176 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 C12orf66Q96MD2 445 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 PHACTR1Q9C0D0 580 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 MTRRQ9UBK8 725 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 PGAP2Q9UHJ9 254 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 STC2O76061 302 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 OAZ2O95190 189 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 ASLP04424 464 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 EPCAMP16422 314 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 CHIT1Q13231 466 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 TOMM20Q15388 145 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 PLEKHG6Q3KR16 790 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 WFIKKN2Q8TEU8 576 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 TWIST2Q8WVJ9 160 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 NUS1Q96E22 293 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 C19orf60Q96EN9 201 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 CDK15Q96Q40 435 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 CARS2Q9HA77 564 aaKnown RBP13.59□□□□□ -0.23
SMC6-201ENST00000351948 KRT84Q9NSB2 600 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 SIRPGQ9P1W8 387 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 SLCO3A1Q9UIG8 710 aa13.59□□□□□ -0.23
SMC6-201ENST00000351948 ANKRD36CQ5JPF3 1778 aa13.58□□□□□ -0.23
SMC6-201ENST00000351948 ENTPD5O75356 428 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 HOXB2P14652 356 aa13.58□□□□□ -0.24
SMC6-201ENST00000351948 ALAS2P22557 587 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms