RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 NSMCE3Q96MG7 304 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 SEPHS2Q99611 448 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 PKMYT1Q99640 499 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 PNMA8BQ9ULN7 279 aaPredicted RBP10.32□□□□□ -0.76
SMPD4-201ENST00000351288 PSMD13Q9UNM6 376 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 USP22Q9UPT9 525 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 HEMK1Q9Y5R4 338 aaPredicted RBP10.32□□□□□ -0.76
SMPD4-201ENST00000351288 TDRD15B5MCY1 1934 aaKnown RBP10.32□□□□□ -0.76
SMPD4-201ENST00000351288 hCG_2014768A0A024R1R8 64 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 A0A087X1B8 175 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 ANKRD66B4E2M5 251 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 PDLIM1O00151 329 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 IGLV3-25P01717 112 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 SERPIND1P05546 499 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 PKMP14618 531 aaKnown RBP10.32□□□□□ -0.76
SMPD4-201ENST00000351288 SLC2A4P14672 509 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 SERPINA4P29622 427 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 GRIA3P42263 894 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 HSPA7P48741 367 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 OR4D1Q15615 310 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.32□□□□□ -0.76
SMPD4-201ENST00000351288 SYTL3Q4VX76 610 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 ARHGAP15Q53QZ3 475 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 AAGABQ6PD74 315 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 ST13P4Q8IZP2 240 aaPredicted RBP10.32□□□□□ -0.76
SMPD4-201ENST00000351288 MED8Q96G25 268 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 WRAP53Q9BUR4 548 aaKnown RBP10.32□□□□□ -0.76
SMPD4-201ENST00000351288 THEGQ9P2T0 379 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 SLC25A13Q9UJS0 675 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 IKZF3Q9UKT9 509 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 ASB3Q9Y575 518 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 DOCK6Q96HP0 2047 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 GSTA4O15217 222 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 CLASP2O75122 1294 aaKnown RBP10.31□□□□□ -0.76
SMPD4-201ENST00000351288 FGBP02675 491 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 SOD2P04179 222 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 ALDOCP09972 364 aaKnown RBP10.31□□□□□ -0.76
SMPD4-201ENST00000351288 ZNF7P17097 686 aaPredicted RBP10.31□□□□□ -0.76
SMPD4-201ENST00000351288 LAG3P18627 525 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 MAGEA11P43364 429 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 MAPKAPK2P49137 400 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 LIN52Q52LA3 116 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 REP15Q6BDI9 236 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 NECAB2Q7Z6G3 386 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 GRASPQ7Z6J2 395 aaPredicted RBP10.31□□□□□ -0.76
SMPD4-201ENST00000351288 ISCA2Q86U28 154 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 EEF1AKMT1Q8WVE0 214 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 ATG10Q9H0Y0 220 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 ASCC3Q8N3C0 2202 aaKnown RBP10.31□□□□□ -0.76
SMPD4-201ENST00000351288 A0A0C4DFX4 3053 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 GNGT2O14610 69 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 PIP5K1BO14986 540 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 ZNF189O75820 626 aaPredicted RBP10.31□□□□□ -0.76
SMPD4-201ENST00000351288 NCK1P16333 377 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 EFNA1P20827 205 aaPredicted RBP10.31□□□□□ -0.76
SMPD4-201ENST00000351288 NFKBIAP25963 317 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 DIO3P55073 304 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 TRAF2Q12933 501 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 MANEALQ5VSG8 457 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 SMYD5Q6GMV2 418 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 CYHR1Q6ZMK1 362 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 PIANPQ8IYJ0 282 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 ZNF784Q8NCA9 323 aaPredicted RBP10.31□□□□□ -0.76
SMPD4-201ENST00000351288 SLC29A1Q99808 456 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 LINC00597Q9H2U6 94 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 COQ10BQ9H8M1 238 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 AKTIPQ9H8T0 292 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 LIN28AQ9H9Z2 209 aaKnown RBP10.31□□□□□ -0.76
SMPD4-201ENST00000351288 ARL15Q9NXU5 204 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.31□□□□□ -0.76
SMPD4-201ENST00000351288 PCDHGA7Q9Y5G6 932 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 SLC7A4O43246 635 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 LZTS3O60299 673 aaPredicted RBP10.31□□□□□ -0.76
SMPD4-201ENST00000351288 TBC1D4O60343 1298 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 S1PR4O95977 384 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 HALP42357 657 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 CDH15P55291 814 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 ABRQ12979 859 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 NFYCQ13952 458 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 ACOX1Q15067 660 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 TEAD2Q15562 447 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 C18orf21Q32NC0 220 aaPredicted RBP10.31□□□□□ -0.76
SMPD4-201ENST00000351288 RARS2Q5T160 578 aaKnown RBP10.31□□□□□ -0.76
SMPD4-201ENST00000351288 ARTNQ5T4W7 220 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 METTL21CQ5VZV1 264 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 AFTPHQ6ULP2 937 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 SERPINA9Q86WD7 417 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 PGAM4Q8N0Y7 254 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 JADE3Q92613 823 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 CCDC126Q96EE4 140 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 SLC30A3Q99726 388 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 TBCDQ9BTW9 1192 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 THUMPD3Q9BV44 507 aaKnown RBP10.31□□□□□ -0.76
SMPD4-201ENST00000351288 SOX17Q9H6I2 414 aaPredicted RBP10.31□□□□□ -0.76
SMPD4-201ENST00000351288 ZNF334Q9HCZ1 680 aaPredicted RBP10.31□□□□□ -0.76
SMPD4-201ENST00000351288 CACNA2D2Q9NY47 1150 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 LZTS1Q9Y250 596 aa10.31□□□□□ -0.76
SMPD4-201ENST00000351288 TGM5O43548 720 aa10.3□□□□□ -0.76
SMPD4-201ENST00000351288 LDB2O43679 373 aa10.3□□□□□ -0.76
SMPD4-201ENST00000351288 OR4F21O95013 312 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms