RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 NADKO95544 446 aaPredicted RBP14.64□□□□□ -0.07
NUP50-201ENST00000347635 ANXA5P08758 320 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 SNRPD1P62314 119 aaKnown RBP14.64□□□□□ -0.07
NUP50-201ENST00000347635 PARP15Q460N3 678 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 OR52E8Q6IFG1 317 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 ARFGAP1Q8N6T3 406 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 STYXQ8WUJ0 223 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 STARD8Q92502 1023 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 C1QTNF7Q9BXJ2 289 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 CCNB1IP1Q9NPC3 277 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 SLC27A5Q9Y2P5 690 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 DGKBQ9Y6T7 804 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 ALDH1A2O94788 518 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 OR56A5P0C7T3 313 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 HOXB6P17509 224 aaKnown RBP14.64□□□□□ -0.07
NUP50-201ENST00000347635 RFTN1Q14699 578 aaPredicted RBP14.64□□□□□ -0.07
NUP50-201ENST00000347635 GDF6Q6KF10 455 aaPredicted RBP14.64□□□□□ -0.07
NUP50-201ENST00000347635 TAPT1Q6NXT6 567 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 HEATR4Q86WZ0 1026 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 BTN2A3PQ96KV6 586 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 SLC39A3Q9BRY0 314 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 TDRD1Q9BXT4 1180 aaKnown RBP14.64□□□□□ -0.07
NUP50-201ENST00000347635 TUBA8Q9NY65 449 aaPredicted RBP14.64□□□□□ -0.07
NUP50-201ENST00000347635 SH3BP4Q9P0V3 963 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 ENOPH1Q9UHY7 261 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 NCKAP1Q9Y2A7 1128 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 TLE2Q04725 743 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 PRKCQQ04759 706 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 LSAMPQ13449 338 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 ARMC6Q6NXE6 501 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 EXOC2Q96KP1 924 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 GPR21Q99679 349 aa14.64□□□□□ -0.07
NUP50-201ENST00000347635 KLHL33A6NCF5 533 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 ZBTB11O95625 1053 aaPredicted RBP14.63□□□□□ -0.07
NUP50-201ENST00000347635 KCNE1P15382 129 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 INTS11Q5TA45 600 aaKnown RBP14.63□□□□□ -0.07
NUP50-201ENST00000347635 HFE2Q6ZVN8 426 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 HMCESQ96FZ2 354 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 REXO5Q96IC2 774 aaKnown RBP14.63□□□□□ -0.07
NUP50-201ENST00000347635 KIFC1Q9BW19 673 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 AKTIPQ9H8T0 292 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 ABCB10Q9NRK6 738 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 HNRNPCL2B2RXH8 293 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 ARPC2O15144 300 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 UGT2B11O75310 529 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 SERPIND1P05546 499 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 MTHFD1P11586 935 aaKnown RBP14.63□□□□□ -0.07
NUP50-201ENST00000347635 CNTN1Q12860 1018 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 FBXO48Q5FWF7 155 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 CYP4Z1Q86W10 505 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 ITCHQ96J02 903 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 NUSAP1Q9BXS6 441 aaKnown RBP14.63□□□□□ -0.07
NUP50-201ENST00000347635 EPB41L1Q9H4G0 881 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 ASB8Q9H765 288 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 PADI4Q9UM07 663 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 PDLIM1O00151 329 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 GABRDO14764 452 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 ZBTB14O43829 449 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 CYP4B1P13584 511 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 CCND3P30281 292 aaPredicted RBP14.63□□□□□ -0.07
NUP50-201ENST00000347635 NDST2P52849 883 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 SMAD3P84022 425 aaKnown RBP14.63□□□□□ -0.07
NUP50-201ENST00000347635 GALNT2Q10471 571 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 CBX3Q13185 183 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 HNRNPDQ14103 355 aaKnown RBP14.63□□□□□ -0.07
NUP50-201ENST00000347635 BOP1Q14137 746 aaKnown RBP14.63□□□□□ -0.07
NUP50-201ENST00000347635 AP5B1Q2VPB7 878 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 TPGS2Q68CL5 300 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 ERMP1Q7Z2K6 904 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 SUSD6Q92537 303 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 NELL1Q92832 810 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 NPY6RQ99463 290 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 GIMAP4Q9NUV9 329 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 DNAAF2Q9NVR5 837 aaKnown RBP14.63□□□□□ -0.07
NUP50-201ENST00000347635 SLC2A6Q9UGQ3 507 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 OAZ3Q9UMX2 235 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 HLA-DQB2P05538 268 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 PKMP14618 531 aaKnown RBP14.63□□□□□ -0.07
NUP50-201ENST00000347635 FPGSQ05932 587 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 SULT2A1Q06520 285 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 DUSP4Q13115 394 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 C1DQ13901 141 aaKnown RBP14.63□□□□□ -0.07
NUP50-201ENST00000347635 C17orf99Q6UX52 265 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 AMER2Q8N7J2 671 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 OR4K2Q8NGD2 314 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 MCOLN3Q8TDD5 553 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 CHID1Q9BWS9 393 aa14.63□□□□□ -0.07
NUP50-201ENST00000347635 AGO1Q9UL18 857 aaKnown RBP14.63□□□□□ -0.07
NUP50-201ENST00000347635 TDRKHQ9Y2W6 561 aaKnown RBP14.63□□□□□ -0.07
NUP50-201ENST00000347635 LOC100506127A0A0U1RQW1 187 aa14.62□□□□□ -0.07
NUP50-201ENST00000347635 CCDC85CA6NKD9 419 aa14.62□□□□□ -0.07
NUP50-201ENST00000347635 SPIDRQ14159 915 aa14.62□□□□□ -0.07
NUP50-201ENST00000347635 LDLRAP1Q5SW96 308 aa14.62□□□□□ -0.07
NUP50-201ENST00000347635 USP45Q70EL2 814 aa14.62□□□□□ -0.07
NUP50-201ENST00000347635 PARP8Q8N3A8 854 aa14.62□□□□□ -0.07
NUP50-201ENST00000347635 MYDGFQ969H8 173 aa14.62□□□□□ -0.07
NUP50-201ENST00000347635 MED8Q96G25 268 aa14.62□□□□□ -0.07
NUP50-201ENST00000347635 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.62□□□□□ -0.07
NUP50-201ENST00000347635 NT5C1B-RDH14C9J2C7 533 aa14.62□□□□□ -0.07
NUP50-201ENST00000347635 PROZP22891 400 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms