RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 FGF18O76093 207 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 SERPINA3P01011 423 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 PDGFAP04085 211 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 TYRP14679 529 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 GIFP27352 417 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 GBX2P52951 348 aaPredicted RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 FAXCQ5TGI0 409 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 SLC13A5Q86YT5 568 aaPredicted RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 AQP12AQ8IXF9 295 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 OR1M1Q8NGA1 313 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 USP29Q9HBJ7 922 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 RBM12Q9NTZ6 932 aaKnown RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 LYARQ9NX58 379 aaKnown RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 IL37Q9NZH6 218 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 CACNB4O00305 520 aaPredicted RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 FKTNO75072 461 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 CA5AP35218 305 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 ETFBP38117 255 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 SLC1A2P43004 574 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 PFKPQ01813 784 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF267Q14586 743 aaPredicted RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 SHROOM1Q2M3G4 852 aaPredicted RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 SLAIN1Q8ND83 568 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 NLGN2Q8NFZ4 835 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 WDR20Q8TBZ3 569 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 ISOC1Q96CN7 298 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 IFT27Q9BW83 186 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 PCED1AQ9H1Q7 454 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 PCDH9Q9HC56 1237 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 EIF3KQ9UBQ5 218 aaKnown RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 MST1RQ04912 1400 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 K7ERQ8 282 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 DFFBO76075 338 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 GYPCP04921 128 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 EPHA5P54756 1037 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF174Q15697 407 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 SLC22A10Q63ZE4 541 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 DENND1BQ6P3S1 775 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 ADIPOR2Q86V24 386 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 LRRC34Q8IZ02 419 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 FBXW8Q8N3Y1 598 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 KCTD6Q8NC69 237 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 MCFD2Q8NI22 146 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 SUCLG2Q96I99 432 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 CAMKK2Q96RR4 588 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 DHX35Q9H5Z1 703 aaKnown RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 MOB1AQ9H8S9 216 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 PAG1Q9NWQ8 432 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 KLF2Q9Y5W3 355 aaPredicted RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 FAM205CA6NFA0 338 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 HMX3A6NHT5 357 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 METTL18O95568 372 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 CYP17A1P05093 508 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 BMP2P12643 396 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 PAICSP22234 425 aaKnown RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 GRIA3P42263 894 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 DLK1P80370 383 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 C2orf80Q0P641 193 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 C2orf76Q3KRA6 126 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 GXYLT1Q4G148 440 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 SLC22A25Q6T423 547 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF431Q8TF32 576 aaPredicted RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 ANKEF1Q9NU02 776 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 XDHP47989 1333 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 H7C4K7 107 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 POLD2P49005 469 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 PRKCDQ05655 676 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 CIAPIN1Q6FI81 312 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF773Q6PK81 442 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 C19orf35Q6ZS72 473 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 COX15Q7KZN9 410 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 ZSCAN1Q8NBB4 408 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 SNX33Q8WV41 574 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 SLC30A2Q9BRI3 323 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 SLC22A11Q9NSA0 550 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 TMEM216Q9P0N5 145 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF98A6NK75 572 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 DIRAS1O95057 198 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 OR52Z1P0C646 297 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 OTX1P32242 354 aaPredicted RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 BTDP43251 543 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 GRIK2Q13002 908 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 SGMS1Q86VZ5 419 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 METTL13Q8N6R0 699 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 C3orf58Q8NDZ4 430 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 RP9Q8TA86 221 aaKnown RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 PRCCQ92733 491 aaPredicted RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 LYRM2Q9NU23 88 aaPredicted RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 EMSYQ7Z589 1322 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 OR6C74A6NCV1 312 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 PRAMEF1O95521 474 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 GTF2F2P13984 249 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 HLA-DMAP28067 261 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 SLC7A1P30825 629 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 NAPAP54920 295 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 AGKQ53H12 422 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 DOK6Q6PKX4 331 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 SYTL1Q8IYJ3 562 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 PCDH20Q8N6Y1 951 aaKnown RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 FAM156AQ8NDB6 213 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms