RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 DENND6AQ8IWF6 608 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 BRSK1Q8TDC3 778 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 BSNDQ8WZ55 320 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 MED8Q96G25 268 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 GINS4Q9BRT9 223 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 NLNQ9BYT8 704 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 SLC22A4Q9H015 551 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 ARMC7Q9H6L4 198 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 ZNF395Q9H8N7 513 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-203ENST00000343508 MOCS1Q9NZB8 636 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 SEC14L4Q9UDX3 406 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 MYH14Q7Z406 1995 aaKnown RBP4.75□□□□□ -1.65
CSMD3-203ENST00000343508 FAM240BA0A1B0GVZ2 78 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 ILVBLA1L0T0 632 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 PIP5K1BO14986 540 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 DHX15O43143 795 aaKnown RBP4.75□□□□□ -1.65
CSMD3-203ENST00000343508 ALDH1A2O94788 518 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 STAU1O95793 577 aaKnown RBP4.75□□□□□ -1.65
CSMD3-203ENST00000343508 IRF1P10914 325 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 GM2AP17900 193 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 GPD2P43304 727 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 CNTN2Q02246 1040 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 PLEKHG4Q58EX7 1191 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 TMPRSS11AQ6ZMR5 421 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 KRT74Q7RTS7 529 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 ZC3H7AQ8IWR0 971 aaKnown RBP4.75□□□□□ -1.65
CSMD3-203ENST00000343508 MINDY1Q8N5J2 469 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 CRELD1Q96HD1 420 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 ZNF490Q9ULM2 529 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-203ENST00000343508 NR4A1P22736 598 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 CTSKP43235 329 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 MAPK9P45984 424 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 DAG1Q14118 895 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 PARP15Q460N3 678 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 SLC22A16Q86VW1 577 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 GATAD2AQ86YP4 633 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 C1orf127Q8N9H9 656 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 TMEM159Q96B96 161 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 ZNF358Q9NW07 568 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 SPATA7Q9P0W8 599 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 POLR3HQ9Y535 204 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-203ENST00000343508 SSNA1O43805 119 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 AMHP03971 560 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 RORCP51449 518 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 OR2B6P58173 313 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 CLDN10P78369 228 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 BCL2L1Q07817 233 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 DDX39BQ13838 428 aaKnown RBP4.75□□□□□ -1.65
CSMD3-203ENST00000343508 SIM2Q14190 667 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-203ENST00000343508 NCBP2-AS2Q69YL0 99 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 OVOS1Q6IE37 1185 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 RALGPS2Q86X27 583 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-203ENST00000343508 ZDHHC21Q8IVQ6 265 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 IGDCC3Q8IVU1 814 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 RBFAQ8N0V3 343 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 DHRS4Q9BTZ2 278 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 CCM2LQ9NUG4 571 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-203ENST00000343508 UXTQ9UBK9 157 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-203ENST00000343508 SCN7AQ01118 1682 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 A0A1B0GVG6 124 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 FADS2P1A8MWK0 482 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 H7C4K7 107 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 CBX4O00257 560 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 RPP40O75818 363 aaKnown RBP4.75□□□□□ -1.65
CSMD3-203ENST00000343508 LPOP22079 712 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-203ENST00000343508 GMFBP60983 142 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 EFEMP1Q12805 493 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 R3HCC1LQ7Z5L2 792 aaKnown RBP4.75□□□□□ -1.65
CSMD3-203ENST00000343508 LINGO1Q96FE5 620 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 SLC39A8Q9C0K1 460 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 CRISPLD1Q9H336 500 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 CPNE5Q9HCH3 593 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 FOCADQ5VW36 1801 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 AURKAO14965 403 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 ZW10O43264 779 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 NOBOXO60393 691 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 CFHP08603 1231 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 NCK1P16333 377 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 ICAM3P32942 547 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 NUP62P37198 522 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-203ENST00000343508 GNPDA1P46926 289 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 DDI2Q5TDH0 399 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 ANKRD13BQ86YJ7 626 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 TRPV3Q8NET8 790 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 LPCAT1Q8NF37 534 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 OR10A6Q8NH74 314 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 SIGLEC10Q96LC7 697 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 UROC1Q96N76 676 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 ASB8Q9H765 288 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 EBF1Q9UH73 591 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 SLC25A13Q9UJS0 675 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 ZNF222Q9UK12 451 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 OGDHLQ9ULD0 1010 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 PRG3Q9Y2Y8 225 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-203ENST00000343508 TOR1BO14657 336 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 CCNDBP1O95273 360 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 PGLSO95336 258 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 CLDN9O95484 217 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 SERPIND1P05546 499 aa4.75□□□□□ -1.65
CSMD3-203ENST00000343508 GALNT1Q10472 559 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms