RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 MAB21L1Q13394 359 aa12.76□□□□□ -0.37
USP47-202ENST00000339865 DCST1Q5T197 706 aa12.76□□□□□ -0.37
USP47-202ENST00000339865 CRYBG2Q8N1P7 616 aa12.76□□□□□ -0.37
USP47-202ENST00000339865 OR10G6Q8NH81 332 aa12.76□□□□□ -0.37
USP47-202ENST00000339865 RELTQ969Z4 430 aa12.76□□□□□ -0.37
USP47-202ENST00000339865 OR6C6A6NF89 314 aa12.76□□□□□ -0.37
USP47-202ENST00000339865 TSEN2Q8NCE0 465 aaKnown RBP12.76□□□□□ -0.37
USP47-202ENST00000339865 AARSD1Q9BTE6 412 aaKnown RBP12.76□□□□□ -0.37
USP47-202ENST00000339865 GTPBP2Q9BX10 602 aaKnown RBP12.76□□□□□ -0.37
USP47-202ENST00000339865 TKTL2Q9H0I9 626 aa12.76□□□□□ -0.37
USP47-202ENST00000339865 C17orf75Q9HAS0 396 aa12.76□□□□□ -0.37
USP47-202ENST00000339865 ANKEF1Q9NU02 776 aa12.76□□□□□ -0.37
USP47-202ENST00000339865 MTMR4Q9NYA4 1195 aa12.76□□□□□ -0.37
USP47-202ENST00000339865 OTCP00480 354 aa12.76□□□□□ -0.37
USP47-202ENST00000339865 TTPAP49638 278 aa12.76□□□□□ -0.37
USP47-202ENST00000339865 DPYSL3Q14195 570 aa12.76□□□□□ -0.37
USP47-202ENST00000339865 CLCA4Q14CN2 919 aa12.76□□□□□ -0.37
USP47-202ENST00000339865 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.76□□□□□ -0.37
USP47-202ENST00000339865 PHTF2Q8N3S3 785 aa12.76□□□□□ -0.37
USP47-202ENST00000339865 CERS2Q96G23 380 aa12.76□□□□□ -0.37
USP47-202ENST00000339865 RADILQ96JH8 1075 aa12.76□□□□□ -0.37
USP47-202ENST00000339865 SLC39A3Q9BRY0 314 aa12.76□□□□□ -0.37
USP47-202ENST00000339865 CXorf21Q9HAI6 301 aa12.76□□□□□ -0.37
USP47-202ENST00000339865 IFT80Q9P2H3 777 aaPredicted RBP12.76□□□□□ -0.37
USP47-202ENST00000339865 MAP4K5Q9Y4K4 846 aa12.76□□□□□ -0.37
USP47-202ENST00000339865 HSBP1L1C9JCN9 74 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 ASLP04424 464 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 KRBOX4Q5JUW0 171 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 LRRN1Q6UXK5 716 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 CLEC10AQ8IUN9 316 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 SLC7A6OSQ96CW6 309 aaPredicted RBP12.75□□□□□ -0.37
USP47-202ENST00000339865 CXorf40BQ96DE9 158 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 TREX2Q9BQ50 279 aaPredicted RBP12.75□□□□□ -0.37
USP47-202ENST00000339865 PXMP2Q9NR77 195 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 TIMM13Q9Y5L4 95 aaPredicted RBP12.75□□□□□ -0.37
USP47-202ENST00000339865 TNFRSF11BO00300 401 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 PITPNM1O00562 1244 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 SULT1B1O43704 296 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 BUD23O43709 281 aaKnown RBP12.75□□□□□ -0.37
USP47-202ENST00000339865 RPLP0P05388 317 aaKnown RBP12.75□□□□□ -0.37
USP47-202ENST00000339865 LAMP2P13473 410 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 PTPN11Q06124 597 aaPredicted RBP12.75□□□□□ -0.37
USP47-202ENST00000339865 RAET1GQ6H3X3 334 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 FBXO33Q7Z6M2 555 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 LGI2Q8N0V4 545 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 XAGE5Q8WWM1 108 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 FERD3LQ96RJ6 166 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 MYOCQ99972 504 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 HEPHQ9BQS7 1158 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 LGR4Q9BXB1 951 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 CAPN14A8MX76 684 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 ACSL1P33121 698 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 PUM1Q14671 1186 aaKnown RBP eCLIP12.75□□□□□ -0.37
USP47-202ENST00000339865 VPS26BQ4G0F5 336 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 RETSATQ6NUM9 610 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 C3orf67Q6ZVT6 689 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 SLC37A3Q8NCC5 494 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 S100A14Q9HCY8 104 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 ENY2Q9NPA8 101 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 MAGEL2Q9UJ55 1249 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 HSPB11Q9Y547 144 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 UMODL1Q5DID0 1318 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 FARS2O95363 451 aaKnown RBP12.75□□□□□ -0.37
USP47-202ENST00000339865 CPN2P22792 545 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 RBL1P28749 1068 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 CHRNA5P30532 468 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 RAB10P61026 200 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 PDK4Q16654 411 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 TCF25Q9BQ70 676 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.75□□□□□ -0.37
USP47-202ENST00000339865 ISM1B1AKI9 464 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 PAX3P23760 479 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 LCN1P31025 176 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 GNA12Q03113 381 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 CPTPQ5TA50 214 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 GALNT12Q8IXK2 581 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 OR2T34Q8NGX1 318 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 OR2T3Q8NH03 318 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 LPAR1Q92633 364 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 C7orf50Q9BRJ6 194 aaKnown RBP12.75□□□□□ -0.37
USP47-202ENST00000339865 MFHAS1Q9Y4C4 1052 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 A0A087X0B3 334 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 UGT1A9O60656 530 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 RP2O75695 350 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 UGT1A6P19224 532 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 UGT1A1P22309 533 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 UGT1A4P22310 534 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 UGT1A3P35503 534 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 GIT2Q14161 759 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 LARS2Q15031 903 aaKnown RBP12.75□□□□□ -0.37
USP47-202ENST00000339865 YTHDF3Q7Z739 585 aaKnown RBP12.75□□□□□ -0.37
USP47-202ENST00000339865 CADM2Q8N3J6 435 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 UGT1A7Q9HAW7 530 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 UGT1A10Q9HAW8 530 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 UGT1A8Q9HAW9 530 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 ETNK2Q9NVF9 386 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 HEMK1Q9Y5R4 338 aaPredicted RBP12.75□□□□□ -0.37
USP47-202ENST00000339865 MYBL2P10244 700 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 SERPINA4P29622 427 aa12.75□□□□□ -0.37
USP47-202ENST00000339865 GLYATQ6IB77 296 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms