RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 TMPRSS11EQ9UL52 423 aa15.32■□□□□ 0.04
LIMS1-202ENST00000338045 PRSS21Q9Y6M0 314 aa15.32■□□□□ 0.04
LIMS1-202ENST00000338045 STON1Q9Y6Q2 735 aa15.32■□□□□ 0.04
LIMS1-202ENST00000338045 UNC80Q8N2C7 3258 aa15.32■□□□□ 0.04
LIMS1-202ENST00000338045 A8MT66 165 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 IQCF5A8MTL0 148 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 E5RI56 91 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 IPO13O94829 963 aaKnown RBP15.31■□□□□ 0.04
LIMS1-202ENST00000338045 EPHX1P07099 455 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 KCNA5P22460 613 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 NSG1P42857 185 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 KIR2DL1P43626 348 aaPredicted RBP15.31■□□□□ 0.04
LIMS1-202ENST00000338045 NAGLUP54802 743 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 NFKB2Q00653 900 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 AAK1Q2M2I8 961 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 PTRHD1Q6GMV3 140 aaKnown RBP15.31■□□□□ 0.04
LIMS1-202ENST00000338045 MICALL1Q8N3F8 863 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 PPP4R1Q8TF05 950 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 SGF29Q96ES7 293 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 PDLIM5Q96HC4 596 aaKnown RBP15.31■□□□□ 0.04
LIMS1-202ENST00000338045 ATOH8Q96SQ7 321 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 COPS8Q99627 209 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 KDM4CQ9H3R0 1056 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 ABCF3Q9NUQ8 709 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 KCNK4Q9NYG8 393 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 DNAJC16Q9Y2G8 782 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 PLXNB3Q9ULL4 1909 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 PLXNA2O75051 1894 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 TICRRQ7Z2Z1 1910 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 NEMP2A6NFY4 417 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 C1QTNF3-AMACRE9PGA6 284 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 F8W8V4 182 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 H3BQ06 376 aaPredicted RBP15.31■□□□□ 0.04
LIMS1-202ENST00000338045 K7EQS6 105 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 ADRB3P13945 408 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 GM2AP17900 193 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 ETV3P41162 512 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 B4GALNT1Q00973 533 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 ELP6Q0PNE2 266 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 RCN2Q14257 317 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 OR4D1Q15615 310 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 PIWIL4Q7Z3Z4 852 aaKnown RBP15.31■□□□□ 0.04
LIMS1-202ENST00000338045 SLC22A9Q8IVM8 553 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 NRSN1Q8IZ57 195 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 TRAM1L1Q8N609 369 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 CLDN19Q8N6F1 224 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 EZH1Q92800 747 aaPredicted RBP15.31■□□□□ 0.04
LIMS1-202ENST00000338045 SCAMP4Q969E2 229 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 SIKE1Q9BRV8 207 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 ZDHHC4Q9NPG8 344 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 LATS2Q9NRM7 1088 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 CD84Q9UIB8 345 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 HAO1Q9UJM8 370 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 ITM2BQ9Y287 266 aa15.31■□□□□ 0.04
LIMS1-202ENST00000338045 SPTBN5Q9NRC6 3674 aaKnown RBP15.3■□□□□ 0.04
LIMS1-202ENST00000338045 A0A0G2JND7 137 aa15.3■□□□□ 0.04
LIMS1-202ENST00000338045 NPHS1O60500 1241 aa15.3■□□□□ 0.04
LIMS1-202ENST00000338045 KERAO60938 352 aa15.3■□□□□ 0.04
LIMS1-202ENST00000338045 ELFN1P0C7U0 828 aa15.3■□□□□ 0.04
LIMS1-202ENST00000338045 MTHFD2P13995 350 aa15.3■□□□□ 0.04
LIMS1-202ENST00000338045 CTHP32929 405 aa15.3■□□□□ 0.04
LIMS1-202ENST00000338045 SERPINB5P36952 375 aa15.3■□□□□ 0.04
LIMS1-202ENST00000338045 ARFIP2P53365 341 aa15.3■□□□□ 0.04
LIMS1-202ENST00000338045 IL2P60568 153 aa15.3■□□□□ 0.04
LIMS1-202ENST00000338045 CREB5Q02930 508 aa15.3■□□□□ 0.04
LIMS1-202ENST00000338045 CCDC15Q0P6D6 951 aa15.3■□□□□ 0.04
LIMS1-202ENST00000338045 CAMK2GQ13555 558 aaPredicted RBP15.3■□□□□ 0.04
LIMS1-202ENST00000338045 HSF5Q4G112 596 aaPredicted RBP15.3■□□□□ 0.04
LIMS1-202ENST00000338045 FBXL19Q6PCT2 694 aa15.3■□□□□ 0.04
LIMS1-202ENST00000338045 ERN2Q76MJ5 926 aaKnown RBP15.3■□□□□ 0.04
LIMS1-202ENST00000338045 MMAAQ8IVH4 418 aaKnown RBP15.3■□□□□ 0.04
LIMS1-202ENST00000338045 FITM2Q8N6M3 262 aa15.3■□□□□ 0.04
LIMS1-202ENST00000338045 ZNF513Q8N8E2 541 aaPredicted RBP15.3■□□□□ 0.04
LIMS1-202ENST00000338045 COQ10AQ96MF6 247 aa15.3■□□□□ 0.04
LIMS1-202ENST00000338045 ZSCAN5AQ9BUG6 496 aa15.3■□□□□ 0.04
LIMS1-202ENST00000338045 SPATA16Q9BXB7 569 aa15.3■□□□□ 0.04
LIMS1-202ENST00000338045 TMEM120AQ9BXJ8 343 aa15.3■□□□□ 0.04
LIMS1-202ENST00000338045 HDAC8Q9BY41 377 aa15.3■□□□□ 0.04
LIMS1-202ENST00000338045 IKZF3Q9UKT9 509 aa15.3■□□□□ 0.04
LIMS1-202ENST00000338045 COL4A2P08572 1712 aa15.29■□□□□ 0.04
LIMS1-202ENST00000338045 C2CD4DB7Z1M9 353 aa15.29■□□□□ 0.04
LIMS1-202ENST00000338045 SPECC1L-ADORA2AF8WAN1 911 aa15.29■□□□□ 0.04
LIMS1-202ENST00000338045 DCTN3O75935 186 aa15.29■□□□□ 0.04
LIMS1-202ENST00000338045 KIAA0754O94854 1291 aa15.29■□□□□ 0.04
LIMS1-202ENST00000338045 SNUPNO95149 360 aaKnown RBP15.29■□□□□ 0.04
LIMS1-202ENST00000338045 HSPA4LO95757 839 aa15.29■□□□□ 0.04
LIMS1-202ENST00000338045 ALOX15P16050 662 aaPredicted RBP15.29■□□□□ 0.04
LIMS1-202ENST00000338045 LIG3P49916 1009 aa15.29■□□□□ 0.04
LIMS1-202ENST00000338045 LACTB2Q53H82 288 aaPredicted RBP15.29■□□□□ 0.04
LIMS1-202ENST00000338045 GPRC6AQ5T6X5 926 aa15.29■□□□□ 0.04
LIMS1-202ENST00000338045 TXNDC11Q6PKC3 985 aa15.29■□□□□ 0.04
LIMS1-202ENST00000338045 TRIM67Q6ZTA4 783 aa15.29■□□□□ 0.04
LIMS1-202ENST00000338045 CCDC121Q6ZUS5 278 aa15.29■□□□□ 0.04
LIMS1-202ENST00000338045 CYP2U1Q7Z449 544 aa15.29■□□□□ 0.04
LIMS1-202ENST00000338045 WDR75Q8IWA0 830 aaKnown RBP15.29■□□□□ 0.04
LIMS1-202ENST00000338045 CPNE9Q8IYJ1 553 aa15.29■□□□□ 0.04
LIMS1-202ENST00000338045 CHPFQ8IZ52 775 aa15.29■□□□□ 0.04
LIMS1-202ENST00000338045 STAG3L4Q8TBR4 150 aa15.29■□□□□ 0.04
LIMS1-202ENST00000338045 LKAAEAR1Q8TD35 194 aa15.29■□□□□ 0.04
LIMS1-202ENST00000338045 EEF1AKMT1Q8WVE0 214 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms