RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 HCFC2Q9Y5Z7 792 aa8.78□□□□□ -1
SNCA-201ENST00000336904 GOLGA4Q13439 2230 aaKnown RBP8.77□□□□□ -1
SNCA-201ENST00000336904 NUP214P35658 2090 aaPredicted RBP8.77□□□□□ -1
SNCA-201ENST00000336904 ILVBLA1L0T0 632 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 SLCO1B7G3V0H7 640 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 NRP2O60462 931 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 SNX2O60749 519 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 SH3BGRLO75368 114 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 ZNF189O75820 626 aaPredicted RBP8.77□□□□□ -1.01
SNCA-201ENST00000336904 TSPAN12O95859 305 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 URODP06132 367 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 VCLP18206 1134 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 GRIA2P42262 883 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 HK2P52789 917 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 POLE2P56282 527 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 STX1BP61266 288 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 ACVR1Q04771 509 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 LRP8Q14114 963 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 IKBKEQ14164 716 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 THEMIS2Q5TEJ8 643 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 OR52E8Q6IFG1 317 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 IRGCQ6NXR0 463 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 SPPL2CQ8IUH8 684 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 SLC22A9Q8IVM8 553 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 PPP1R2P1Q96PQ5 205 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 SERPINI1Q99574 410 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 ASB8Q9H765 288 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 NOL11Q9H8H0 719 aaKnown RBP8.77□□□□□ -1.01
SNCA-201ENST00000336904 PRM3Q9NNZ6 103 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 ZDHHC4Q9NPG8 344 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 DONSONQ9NYP3 566 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 UBAP1Q9NZ09 502 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 ZNF711Q9Y462 761 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 ANAPC1Q9H1A4 1944 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 SAC3D1A6NKF1 404 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 UPK3BL1B0FP48 263 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 UPK3BL2E5RIL1 263 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 VPS26AO75436 327 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 SOD2P04179 222 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 ATP5BP06576 529 aaKnown RBP8.77□□□□□ -1.01
SNCA-201ENST00000336904 ATP6V1B2P21281 511 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 SQLEQ14534 574 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 SLC14A2Q15849 920 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 DGKKQ5KSL6 1271 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 PTRHD1Q6GMV3 140 aaKnown RBP8.77□□□□□ -1.01
SNCA-201ENST00000336904 LETMD1Q6P1Q0 360 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 SLC39A5Q6ZMH5 540 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 FRA10AC1Q70Z53 315 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 SERPINA9Q86WD7 417 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 GPSM1Q86YR5 675 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 CLYBLQ8N0X4 340 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 GABPB2Q8TAK5 448 aaPredicted RBP8.77□□□□□ -1.01
SNCA-201ENST00000336904 STAG3L4Q8TBR4 150 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 GATA6Q92908 595 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 TCEAL4Q96EI5 215 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 MYO19Q96H55 970 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 YME1L1Q96TA2 773 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 YY1AP1Q9H869 796 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 ABCB8Q9NUT2 735 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 MAP10Q9P2G4 905 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 ZNHIT2Q9UHR6 403 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 SLC30A1Q9Y6M5 507 aa8.77□□□□□ -1.01
SNCA-201ENST00000336904 PDLIM1O00151 329 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 PITPNM1O00562 1244 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 NME4O00746 187 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 ACOT8O14734 319 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 B3GALT4O96024 378 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 GPX3P22352 226 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 PRDX6P30041 224 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 CCR2P41597 374 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 DGKQP52824 942 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 MRPS35P82673 323 aaKnown RBP8.76□□□□□ -1.01
SNCA-201ENST00000336904 SATB1Q01826 763 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 LMAN2Q12907 356 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 CBX2Q14781 532 aaPredicted RBP8.76□□□□□ -1.01
SNCA-201ENST00000336904 PHKG1Q16816 387 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 TYSND1Q2T9J0 566 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 PAGE3Q5JUK9 113 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 NCEH1Q6PIU2 408 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 RALGPS2Q86X27 583 aaPredicted RBP8.76□□□□□ -1.01
SNCA-201ENST00000336904 SLC22A15Q8IZD6 547 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 MYO1HQ8N1T3 1032 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 RNF175Q8N4F7 328 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 TTC30BQ8N4P2 665 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 LMNTD1Q8N9Z9 388 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 FOXJ1Q92949 421 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 CCDC126Q96EE4 140 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 L3HYPDHQ96EM0 354 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 ZNF558Q96NG5 402 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 EGFL8Q99944 293 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 ADGRE3Q9BY15 652 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 HACD3Q9P035 362 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 SLCO3A1Q9UIG8 710 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 CORO1CQ9ULV4 474 aaPredicted RBP8.76□□□□□ -1.01
SNCA-201ENST00000336904 PKP3Q9Y446 797 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 TGM5O43548 720 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 KERAO60938 352 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 ABLIM3O94929 683 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 PAX3P23760 479 aa8.76□□□□□ -1.01
SNCA-201ENST00000336904 OXTRP30559 389 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms