RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 REM2Q8IYK8 340 aaPredicted RBP16.41■□□□□ 0.22
CDC42EP4-201ENST00000335793 FIBCD1Q8N539 461 aa16.41■□□□□ 0.22
CDC42EP4-201ENST00000335793 ATAD1Q8NBU5 361 aa16.41■□□□□ 0.22
CDC42EP4-201ENST00000335793 C12orf43Q96C57 262 aaKnown RBP16.41■□□□□ 0.22
CDC42EP4-201ENST00000335793 POLR1EQ9GZS1 481 aaKnown RBP16.41■□□□□ 0.22
CDC42EP4-201ENST00000335793 ING2Q9H160 280 aa16.41■□□□□ 0.22
CDC42EP4-201ENST00000335793 MFSD1Q9H3U5 465 aa16.41■□□□□ 0.22
CDC42EP4-201ENST00000335793 OSER1Q9NX31 292 aa16.41■□□□□ 0.22
CDC42EP4-201ENST00000335793 CD274Q9NZQ7 290 aa16.41■□□□□ 0.22
CDC42EP4-201ENST00000335793 CORINQ9Y5Q5 1042 aa16.41■□□□□ 0.22
CDC42EP4-201ENST00000335793 ENPP3O14638 875 aa16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 TNPO2O14787 897 aaKnown RBP16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 CD1DP15813 335 aa16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 OXTRP30559 389 aa16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 TPTEP56180 551 aa16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 MERTKQ12866 999 aa16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 GDF6Q6KF10 455 aaPredicted RBP16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 RALGPS2Q86X27 583 aaPredicted RBP16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 DHRSXQ8N5I4 330 aa16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 STAG3L4Q8TBR4 150 aa16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 C9orf16Q9BUW7 83 aa16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 MARCH7Q9H992 704 aa16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 PCDHGA8Q9Y5G5 932 aa16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 DOCK3Q8IZD9 2030 aa16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 KRBA1A5PL33 1030 aa16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 CCDC154A6NI56 674 aa16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 HMOX2P30519 316 aa16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 TAF1CQ15572 869 aaPredicted RBP16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 RGS21Q2M5E4 152 aa16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 FGD3Q5JSP0 725 aa16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 FBXL22Q6P050 247 aa16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 CARM1Q86X55 608 aa16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 LRRC49Q8IUZ0 686 aa16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 ATP6V0D2Q8N8Y2 350 aa16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 FNDC5Q8NAU1 212 aa16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 FBXO32Q969P5 355 aa16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 PTPN18Q99952 460 aa16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 HGH1Q9BTY7 390 aa16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 NOL6Q9H6R4 1146 aaKnown RBP16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 POLR1BQ9H9Y6 1135 aa16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 TAS2R13Q9NYV9 303 aa16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 SLC27A5Q9Y2P5 690 aa16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 ACTL7AQ9Y615 435 aa16.4■□□□□ 0.22
CDC42EP4-201ENST00000335793 ARPC2O15144 300 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 CHRNA1P02708 482 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 SERPINF2P08697 491 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 ACADVLP49748 655 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 CDK9P50750 372 aaKnown RBP16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 TUSC3Q13454 348 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 E2F2Q14209 437 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 PHKG1Q16816 387 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 WDR45BQ5MNZ6 344 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 PPP4R4Q6NUP7 873 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 MON1AQ86VX9 555 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 CDYL2Q8N8U2 506 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 IGSF8Q969P0 613 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 SEPT5Q99719 369 aaPredicted RBP16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 ALG2Q9H553 416 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 SPC25Q9HBM1 224 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 POLG2Q9UHN1 485 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 E5RI56 91 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 AQP9O43315 295 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 RHOQP17081 205 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 YBX1P67809 324 aaKnown RBP16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 LIPEQ05469 1076 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 RAD51Q06609 339 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 TRAF2Q12933 501 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 PTPRNQ16849 979 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 MS4A13Q5J8X5 152 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 CCSAPQ6IQ19 270 aaPredicted RBP16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 USP43Q70EL4 1123 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 CMTR2Q8IYT2 770 aaKnown RBP16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 CLEC4FQ8N1N0 589 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 BORCS5Q969J3 196 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 FAM193BQ96PV7 902 aaPredicted RBP16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 SLC2A11Q9BYW1 496 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 ADNPQ9H2P0 1102 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 SYTL2Q9HCH5 934 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 BPIFA1Q9NP55 256 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 CCM2LQ9NUG4 571 aaPredicted RBP16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 CMTM6Q9NX76 183 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 HAS3O00219 553 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 CDC7O00311 574 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 SYNCRIPO60506 623 aaKnown RBP16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 ATE1O95260 518 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 NR4A2P43354 598 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 AGTR2P50052 363 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 PRMT9Q6P2P2 845 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 TAS2R42Q7RTR8 314 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 HEATR4Q86WZ0 1026 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 SDR16C5Q8N3Y7 309 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 PARVBQ9HBI1 364 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 MARCH2Q9P0N8 246 aa16.39■□□□□ 0.21
CDC42EP4-201ENST00000335793 A0A0G2JMZ2 1700 aa16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 LRRC37A2A6NM11 1700 aa16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 BBIP1A8MTZ0 92 aa16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 PFDN6O15212 129 aa16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 MGEA5O60502 916 aa16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 KATNA1O75449 491 aa16.38■□□□□ 0.21
CDC42EP4-201ENST00000335793 ZNF37AP17032 561 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms