RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 CCNJLQ8IV13 435 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 CNTN4Q8IWV2 1026 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 NRSN1Q8IZ57 195 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 LILRA3Q8N6C8 439 aaPredicted RBP16.35■□□□□ 0.21
SHOX-201ENST00000334060 RASGEF1AQ8N9B8 481 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 DCAKDQ8WVC6 231 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 BTN2A2Q8WVV5 523 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 GLYATL1Q969I3 302 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 OR2AG1Q9H205 316 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 TCEAL2Q9H3H9 227 aaPredicted RBP16.35■□□□□ 0.21
SHOX-201ENST00000334060 FAM86C1Q9NVL1 165 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 FAM8A1Q9UBU6 413 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 KLF15Q9UIH9 416 aa16.35■□□□□ 0.21
SHOX-201ENST00000334060 MTO1Q9Y2Z2 717 aaKnown RBP16.35■□□□□ 0.21
SHOX-201ENST00000334060 TNRC6BQ9UPQ9 1833 aaKnown RBP16.34■□□□□ 0.21
SHOX-201ENST00000334060 A0A087WUV0 522 aaPredicted RBP16.34■□□□□ 0.21
SHOX-201ENST00000334060 EXOC1LA0A1B0GW35 172 aa16.34■□□□□ 0.21
SHOX-201ENST00000334060 MEI4A8MW99 385 aa16.34■□□□□ 0.21
SHOX-201ENST00000334060 PATE3B3GLJ2 98 aa16.34■□□□□ 0.21
SHOX-201ENST00000334060 SLC25A14O95258 325 aaPredicted RBP16.34■□□□□ 0.21
SHOX-201ENST00000334060 ITGALP20701 1170 aa16.34■□□□□ 0.21
SHOX-201ENST00000334060 FMO4P31512 558 aa16.34■□□□□ 0.21
SHOX-201ENST00000334060 TRIM23P36406 574 aa16.34■□□□□ 0.21
SHOX-201ENST00000334060 CCR5P51681 352 aa16.34■□□□□ 0.21
SHOX-201ENST00000334060 ZNF844Q08AG5 666 aa16.34■□□□□ 0.21
SHOX-201ENST00000334060 TYSND1Q2T9J0 566 aa16.34■□□□□ 0.21
SHOX-201ENST00000334060 PLA2G4EQ3MJ16 856 aa16.34■□□□□ 0.21
SHOX-201ENST00000334060 IQCKQ8N0W5 287 aa16.34■□□□□ 0.21
SHOX-201ENST00000334060 LPGAT1Q92604 370 aa16.34■□□□□ 0.21
SHOX-201ENST00000334060 PEX13Q92968 403 aa16.34■□□□□ 0.21
SHOX-201ENST00000334060 PDXPQ96GD0 296 aa16.34■□□□□ 0.21
SHOX-201ENST00000334060 TTC25Q96NG3 672 aa16.34■□□□□ 0.21
SHOX-201ENST00000334060 BIRC8Q96P09 236 aa16.34■□□□□ 0.21
SHOX-201ENST00000334060 SRPK1Q96SB4 655 aaKnown RBP16.34■□□□□ 0.21
SHOX-201ENST00000334060 FGF22Q9HCT0 170 aa16.34■□□□□ 0.21
SHOX-201ENST00000334060 ATXN10Q9UBB4 475 aa16.34■□□□□ 0.21
SHOX-201ENST00000334060 NFKBIL1Q9UBC1 381 aaPredicted RBP16.34■□□□□ 0.21
SHOX-201ENST00000334060 APPL1Q9UKG1 709 aa16.34■□□□□ 0.21
SHOX-201ENST00000334060 CCDC163A0A0D9SF12 145 aa16.33■□□□□ 0.21
SHOX-201ENST00000334060 UBA6A0AVT1 1052 aaPredicted RBP16.33■□□□□ 0.21
SHOX-201ENST00000334060 AGPSO00116 658 aa16.33■□□□□ 0.21
SHOX-201ENST00000334060 NIPSNAP2O75323 286 aa16.33■□□□□ 0.21
SHOX-201ENST00000334060 TOP3BO95985 862 aaKnown RBP16.33■□□□□ 0.21
SHOX-201ENST00000334060 ABHD2P08910 425 aa16.33■□□□□ 0.21
SHOX-201ENST00000334060 ZNF8P17098 575 aaPredicted RBP16.33■□□□□ 0.21
SHOX-201ENST00000334060 PAMP19021 973 aa16.33■□□□□ 0.21
SHOX-201ENST00000334060 NFKBIAP25963 317 aa16.33■□□□□ 0.21
SHOX-201ENST00000334060 STX2P32856 288 aa16.33■□□□□ 0.21
SHOX-201ENST00000334060 CSNK1EP49674 416 aaKnown RBP16.33■□□□□ 0.21
SHOX-201ENST00000334060 EIF3BP55884 814 aaKnown RBP16.33■□□□□ 0.21
SHOX-201ENST00000334060 XKR5Q6UX68 686 aa16.33■□□□□ 0.21
SHOX-201ENST00000334060 PRR23BQ6ZRT6 265 aa16.33■□□□□ 0.21
SHOX-201ENST00000334060 Q6ZSR6 202 aa16.33■□□□□ 0.21
SHOX-201ENST00000334060 ZNF765Q7L2R6 523 aa16.33■□□□□ 0.21
SHOX-201ENST00000334060 CCDC91Q7Z6B0 441 aa16.33■□□□□ 0.21
SHOX-201ENST00000334060 ADGRG6Q86SQ4 1221 aa16.33■□□□□ 0.21
SHOX-201ENST00000334060 ZNF547Q8IVP9 402 aa16.33■□□□□ 0.21
SHOX-201ENST00000334060 RGL4Q8IZJ4 473 aa16.33■□□□□ 0.21
SHOX-201ENST00000334060 FOXJ1Q92949 421 aa16.33■□□□□ 0.21
SHOX-201ENST00000334060 COX14Q96I36 57 aa16.33■□□□□ 0.21
SHOX-201ENST00000334060 OLFM1Q99784 485 aa16.33■□□□□ 0.21
SHOX-201ENST00000334060 ZSCAN5AQ9BUG6 496 aa16.33■□□□□ 0.21
SHOX-201ENST00000334060 APOOQ9BUR5 198 aa16.33■□□□□ 0.21
SHOX-201ENST00000334060 TEX101Q9BY14 249 aa16.33■□□□□ 0.21
SHOX-201ENST00000334060 WDR26Q9H7D7 661 aa16.33■□□□□ 0.21
SHOX-201ENST00000334060 VIPAS39Q9H9C1 493 aa16.33■□□□□ 0.21
SHOX-201ENST00000334060 TM9SF3Q9HD45 589 aa16.33■□□□□ 0.21
SHOX-201ENST00000334060 AASDHPPTQ9NRN7 309 aa16.33■□□□□ 0.21
SHOX-201ENST00000334060 VPS18Q9P253 973 aa16.33■□□□□ 0.21
SHOX-201ENST00000334060 TSR3Q9UJK0 312 aaKnown RBP16.33■□□□□ 0.21
SHOX-201ENST00000334060 TLDC2A0PJX2 215 aa16.33■□□□□ 0.2
SHOX-201ENST00000334060 DNAJC6O75061 913 aa16.33■□□□□ 0.2
SHOX-201ENST00000334060 SAT1P21673 171 aa16.33■□□□□ 0.2
SHOX-201ENST00000334060 CDKN2DP55273 166 aa16.33■□□□□ 0.2
SHOX-201ENST00000334060 CORO7P57737 925 aa16.33■□□□□ 0.2
SHOX-201ENST00000334060 PFN3P60673 137 aa16.33■□□□□ 0.2
SHOX-201ENST00000334060 MAP9Q49MG5 647 aa16.33■□□□□ 0.2
SHOX-201ENST00000334060 CRTC3Q6UUV7 619 aa16.33■□□□□ 0.2
SHOX-201ENST00000334060 CMC1Q7Z7K0 106 aa16.33■□□□□ 0.2
SHOX-201ENST00000334060 ZC3HC1Q86WB0 502 aaKnown RBP16.33■□□□□ 0.2
SHOX-201ENST00000334060 GPR150Q8NGU9 434 aa16.33■□□□□ 0.2
SHOX-201ENST00000334060 DHRS4Q9BTZ2 278 aa16.33■□□□□ 0.2
SHOX-201ENST00000334060 UNKQ9C0B0 810 aaKnown RBP16.33■□□□□ 0.2
SHOX-201ENST00000334060 ZSCAN32Q9NX65 697 aa16.33■□□□□ 0.2
SHOX-201ENST00000334060 EURLQ9NYK6 297 aa16.33■□□□□ 0.2
SHOX-201ENST00000334060 A0A1W2PR77 199 aa16.32■□□□□ 0.2
SHOX-201ENST00000334060 BNC1Q01954 994 aa16.32■□□□□ 0.2
SHOX-201ENST00000334060 SPATS2Q86XZ4 545 aaKnown RBP16.32■□□□□ 0.2
SHOX-201ENST00000334060 DDHD1Q8NEL9 900 aa16.32■□□□□ 0.2
SHOX-201ENST00000334060 CADM4Q8NFZ8 388 aa16.32■□□□□ 0.2
SHOX-201ENST00000334060 GIMAP7Q8NHV1 300 aa16.32■□□□□ 0.2
SHOX-201ENST00000334060 SLC44A1Q8WWI5 657 aa16.32■□□□□ 0.2
SHOX-201ENST00000334060 TSACCQ96A04 125 aaPredicted RBP16.32■□□□□ 0.2
SHOX-201ENST00000334060 CYTH2Q99418 400 aa16.32■□□□□ 0.2
SHOX-201ENST00000334060 P2RY12Q9H244 342 aa16.32■□□□□ 0.2
SHOX-201ENST00000334060 GULP1Q9UBP9 304 aa16.32■□□□□ 0.2
SHOX-201ENST00000334060 CEACAM5P06731 702 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 CELA2BP08218 269 aaPredicted RBP16.31■□□□□ 0.2
SHOX-201ENST00000334060 NUDT17P0C025 328 aa16.31■□□□□ 0.2
SHOX-201ENST00000334060 TSHRP16473 764 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms