RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 VASPP50552 380 aaPredicted RBP16.8■□□□□ 0.28
DDX41-201ENST00000330503 CDH13P55290 713 aa16.8■□□□□ 0.28
DDX41-201ENST00000330503 GAB4Q2WGN9 574 aa16.8■□□□□ 0.28
DDX41-201ENST00000330503 GPR33Q49SQ1 333 aa16.8■□□□□ 0.28
DDX41-201ENST00000330503 ARSIQ5FYB1 569 aa16.8■□□□□ 0.28
DDX41-201ENST00000330503 RARS2Q5T160 578 aaKnown RBP16.8■□□□□ 0.28
DDX41-201ENST00000330503 LYPLAL1Q5VWZ2 237 aa16.8■□□□□ 0.28
DDX41-201ENST00000330503 RBFAQ8N0V3 343 aa16.8■□□□□ 0.28
DDX41-201ENST00000330503 CLDN19Q8N6F1 224 aa16.8■□□□□ 0.28
DDX41-201ENST00000330503 RBM15BQ8NDT2 890 aaKnown RBP16.8■□□□□ 0.28
DDX41-201ENST00000330503 LKAAEAR1Q8TD35 194 aa16.8■□□□□ 0.28
DDX41-201ENST00000330503 FGF13Q92913 245 aa16.8■□□□□ 0.28
DDX41-201ENST00000330503 SMARCD2Q92925 531 aa16.8■□□□□ 0.28
DDX41-201ENST00000330503 MAELQ96JY0 434 aaKnown RBP16.8■□□□□ 0.28
DDX41-201ENST00000330503 CLPBQ9H078 707 aa16.8■□□□□ 0.28
DDX41-201ENST00000330503 A0A1W2PQ67 120 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 CCDC189A1A4V9 331 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 E5RI56 91 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 BTN3A1O00481 513 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 PPP6CO00743 305 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 TULP3O75386 442 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 LEFTY1O75610 366 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 CD1EP15812 388 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 TIMP2P16035 220 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 FSHRP23945 695 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 RECQLP46063 649 aaPredicted RBP16.79■□□□□ 0.28
DDX41-201ENST00000330503 HK3P52790 923 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 BTKQ06187 659 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 KLF10Q13118 480 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 NAA25Q14CX7 972 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 TMPRSS6Q8IU80 811 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 ETFBKMTQ8IXQ9 262 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 NXPE1Q8N323 547 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 POU5F2Q8N7G0 328 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 BPIFB1Q8TDL5 484 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 PDLIM5Q96HC4 596 aaKnown RBP16.79■□□□□ 0.28
DDX41-201ENST00000330503 APOL5Q9BWW9 433 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 CIPCQ9C0C6 399 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 LMAN2LQ9H0V9 348 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 ZNF385DQ9H6B1 395 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 CDYLQ9Y232 598 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 SLC27A6Q9Y2P4 619 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 TRAF6Q9Y4K3 522 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 SUPT3HB4E1H0 165 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 KLK8O60259 260 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 SUPT3HO75486 399 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 ADH1CP00326 375 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 POLR2LP62875 67 aaKnown RBP16.79■□□□□ 0.28
DDX41-201ENST00000330503 PTRHD1Q6GMV3 140 aaKnown RBP16.79■□□□□ 0.28
DDX41-201ENST00000330503 UGT3A1Q6NUS8 523 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 FAR2Q96K12 515 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 NSUN5Q96P11 429 aaKnown RBP16.79■□□□□ 0.28
DDX41-201ENST00000330503 EBF3Q9H4W6 596 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 BAIAP2L1Q9UHR4 511 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 CRLS1Q9UJA2 301 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 FIS1Q9Y3D6 152 aa16.79■□□□□ 0.28
DDX41-201ENST00000330503 SRPRAP08240 638 aaKnown RBP16.78■□□□□ 0.28
DDX41-201ENST00000330503 GFAPP14136 432 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 ITGB6P18564 788 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 CPOXP36551 454 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 NNMTP40261 264 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 SH3BP2P78314 561 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 TMEM198Q66K66 360 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 BRAT1Q6PJG6 821 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 ACAD11Q709F0 780 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 RAB44Q7Z6P3 723 aaPredicted RBP16.78■□□□□ 0.28
DDX41-201ENST00000330503 FBXO39Q8N4B4 442 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 CPSF7Q8N684 471 aaKnown RBP16.78■□□□□ 0.28
DDX41-201ENST00000330503 WFIKKN2Q8TEU8 576 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 NXPE3Q969Y0 559 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 TTC1Q99614 292 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 IGFLR1Q9H665 355 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.78■□□□□ 0.28
DDX41-201ENST00000330503 GNPTGQ9UJJ9 305 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 TMPRSS11EQ9UL52 423 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 PLA2G4CQ9UP65 541 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 TSPAN11A1L157 253 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 TRPC5OSA6NMA1 111 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 HEPACAM2A8MVW5 462 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 RFXAPO00287 272 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 CDK14O94921 469 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 SLC25A14O95258 325 aaPredicted RBP16.78■□□□□ 0.28
DDX41-201ENST00000330503 SPINT3P49223 89 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 SNCBQ16143 134 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 UGT3A2Q3SY77 523 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 ATP13A5Q4VNC0 1218 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 MACC1Q6ZN28 852 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 ZNF366Q8N895 744 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 PBXIP1Q96AQ6 731 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 FAM83CQ9BQN1 747 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 MEAF6Q9HAF1 191 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 ELOVL2Q9NXB9 296 aa16.78■□□□□ 0.28
DDX41-201ENST00000330503 G3BP2Q9UN86 482 aaKnown RBP16.78■□□□□ 0.28
DDX41-201ENST00000330503 PLXNB3Q9ULL4 1909 aa16.77■□□□□ 0.28
DDX41-201ENST00000330503 SYCE1LA8MT33 242 aa16.77■□□□□ 0.28
DDX41-201ENST00000330503 PRRT4C9JH25 899 aa16.77■□□□□ 0.28
DDX41-201ENST00000330503 ASLP04424 464 aa16.77■□□□□ 0.28
DDX41-201ENST00000330503 EEF1DP29692 281 aaKnown RBP16.77■□□□□ 0.28
DDX41-201ENST00000330503 FBXO48Q5FWF7 155 aa16.77■□□□□ 0.28
DDX41-201ENST00000330503 NXNQ6DKJ4 435 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms