RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 NME4O00746 187 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 GREM1O60565 184 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 ESR1P03372 595 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 UROSP10746 265 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 IDO1P14902 403 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 SLC7A1P30825 629 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 CSKP41240 450 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 PPP3CCP48454 512 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 CLCN7P51798 805 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 DIO3P55073 304 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 CDKL1Q00532 357 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 VEPH1Q14D04 833 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 PABPC1LQ4VXU2 614 aaKnown RBP14.43□□□□□ -0.1
TPM3-206ENST00000330188 LIN52Q52LA3 116 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 XKR7Q5GH72 579 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 PRMT9Q6P2P2 845 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 TAS2R42Q7RTR8 314 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 SPATA19Q7Z5L4 167 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 GALNT4Q8N4A0 578 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 MINDY1Q8N5J2 469 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 ADAMTS19Q8TE59 1207 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 LRTOMTQ8WZ04 291 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 ESAMQ96AP7 390 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 ALG14Q96F25 216 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 HOPXQ9BPY8 73 aaPredicted RBP14.43□□□□□ -0.1
TPM3-206ENST00000330188 HGH1Q9BTY7 390 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 IL1RL2Q9HB29 575 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 DNMT3BQ9UBC3 853 aaKnown RBP14.43□□□□□ -0.1
TPM3-206ENST00000330188 CNOT11Q9UKZ1 510 aaKnown RBP14.43□□□□□ -0.1
TPM3-206ENST00000330188 TMCO1Q9UM00 188 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 ASB1Q9Y576 335 aa14.43□□□□□ -0.1
TPM3-206ENST00000330188 ENO4A6NNW6 628 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 E2F3O00716 465 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 ANGPT2O15123 496 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 FESP07332 822 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 ZNF26P17031 533 aaPredicted RBP14.42□□□□□ -0.1
TPM3-206ENST00000330188 CTPS1P17812 591 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 HSPA13P48723 471 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 MRPL19P49406 292 aaKnown RBP14.42□□□□□ -0.1
TPM3-206ENST00000330188 IRX1P78414 480 aaPredicted RBP14.42□□□□□ -0.1
TPM3-206ENST00000330188 ZXDBP98169 803 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 CACNG1Q06432 222 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 RBBP7Q16576 425 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 BLOC1S3Q6QNY0 202 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 EFL1Q7Z2Z2 1120 aaKnown RBP14.42□□□□□ -0.1
TPM3-206ENST00000330188 LYSMD3Q7Z3D4 306 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 DNAJB7Q7Z6W7 309 aaPredicted RBP14.42□□□□□ -0.1
TPM3-206ENST00000330188 DHFR2Q86XF0 187 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 STK40Q8N2I9 435 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 HJURPQ8NCD3 748 aaPredicted RBP14.42□□□□□ -0.1
TPM3-206ENST00000330188 SLC45A3Q96JT2 553 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 PLEKHG4BQ96PX9 1271 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 UHRF1Q96T88 793 aaPredicted RBP14.42□□□□□ -0.1
TPM3-206ENST00000330188 MAGEE1Q9HCI5 957 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 SARS2Q9NP81 518 aaKnown RBP14.42□□□□□ -0.1
TPM3-206ENST00000330188 AIG1Q9NVV5 245 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 CD274Q9NZQ7 290 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 EIF2B4Q9UI10 523 aaKnown RBP14.42□□□□□ -0.1
TPM3-206ENST00000330188 PCDHGB4Q9UN71 923 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 PKP3Q9Y446 797 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 PCDHGB5Q9Y5G0 923 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 SCN8AQ9UQD0 1980 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 SNX2O60749 519 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 SMIM18P0DKX4 95 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 ATP6V1B2P21281 511 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 RPS6KA2Q15349 733 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 MAP7D1Q3KQU3 841 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 COQ5Q5HYK3 327 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 Q6ZNB5 142 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 OR56A4Q8NGH8 313 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 PBXIP1Q96AQ6 731 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 MYO19Q96H55 970 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 CENPKQ9BS16 269 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 GPR63Q9BZJ6 419 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 SEMA6AQ9H2E6 1030 aa14.42□□□□□ -0.1
TPM3-206ENST00000330188 ZNF334Q9HCZ1 680 aaPredicted RBP14.42□□□□□ -0.1
TPM3-206ENST00000330188 CNOT6Q9ULM6 557 aaKnown RBP14.42□□□□□ -0.1
TPM3-206ENST00000330188 ZNF839A8K0R7 811 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 K7ERQ8 282 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 KIF3CO14782 793 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 AHCYL1O43865 530 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 CSPG5O95196 566 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 CHEK2O96017 543 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 CYBBP04839 570 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 ALPIP09923 528 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 HSPA8P11142 646 aaKnown RBP14.41□□□□□ -0.1
TPM3-206ENST00000330188 HMGCLP35914 325 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 ZFP36L2P47974 494 aaKnown RBP14.41□□□□□ -0.1
TPM3-206ENST00000330188 YBX1P67809 324 aaKnown RBP14.41□□□□□ -0.1
TPM3-206ENST00000330188 TGFBIQ15582 683 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 SPOUT1Q5T280 376 aaKnown RBP14.41□□□□□ -0.1
TPM3-206ENST00000330188 C6orf52Q5T4I8 152 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 IRAK1BP1Q5VVH5 260 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 HMBOX1Q6NT76 420 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 SCIMPQ6UWF3 145 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 GPRIN3Q6ZVF9 776 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 SLC15A3Q8IY34 581 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 DCAF4L2Q8NA75 395 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 OR2T34Q8NGX1 318 aa14.41□□□□□ -0.1
TPM3-206ENST00000330188 OR2T3Q8NH03 318 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms