RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 IRF9Q00978 393 aa10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 CIR1Q86X95 450 aaPredicted RBP10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 NAT8LQ8N9F0 302 aa10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 DCAKDQ8WVC6 231 aa10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 MCRS1Q96EZ8 462 aa10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 LENG8Q96PV6 779 aaPredicted RBP10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 SEMA3GQ9NS98 782 aa10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 PADI3Q9ULW8 664 aa10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 ZNF142P52746 1687 aaPredicted RBP10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 ISM1B1AKI9 464 aa10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 ACSL4O60488 711 aa10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 GNRH1P01148 92 aa10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 NAT16Q8N8M0 369 aa10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 PNPT1Q8TCS8 783 aaKnown RBP10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 SPACA7Q96KW9 195 aa10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 TBATAQ96M53 351 aa10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 PPM1MQ96MI6 270 aa10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 SMPD3Q9NY59 655 aaPredicted RBP10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 NFKBIL1Q9UBC1 381 aaPredicted RBP10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 COQ4Q9Y3A0 265 aa10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 U3KQV3 271 aa10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 PIP5K1BO14986 540 aa10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 UGT1A9O60656 530 aa10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 PEX10O60683 326 aa10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 TULP3O75386 442 aa10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 CXCL14O95715 111 aa10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 CAPN1P07384 714 aa10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 THRBP10828 461 aa10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 LAPTM5Q13571 262 aa10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 TAF1AQ15573 450 aaPredicted RBP10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 KRT74Q7RTS7 529 aa10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 LPIN3Q9BQK8 851 aa10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 UGT1A7Q9HAW7 530 aa10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 UGT1A10Q9HAW8 530 aa10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 UGT1A8Q9HAW9 530 aa10.84□□□□□ -0.67
SNRNP200-201ENST00000323853 ARFGEF2Q9Y6D5 1785 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 SYN3O14994 580 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 NDUFS2O75306 463 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 ADSLP30566 484 aaPredicted RBP10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 CLK3P49761 638 aaKnown RBP10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 YBEYP58557 167 aaPredicted RBP10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 IL10RBQ08334 325 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 KHDC1Q4VXA5 237 aaKnown RBP10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 KLHL12Q53G59 568 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 IL23RQ5VWK5 629 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 KIAA1324Q6UXG2 1013 aaKnown RBP10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 TMPRSS11BQ86T26 416 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 VANGL1Q8TAA9 524 aaPredicted RBP10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 APOLD1Q96LR9 279 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 RACGAP1Q9H0H5 632 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 KCPQ6ZWJ8 1503 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 NALCNQ8IZF0 1738 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 A0A0G2JLL6 359 aaPredicted RBP10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 GSAPA4D1B5 854 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 ERAL1O75616 437 aaKnown RBP10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 C22orf31O95567 290 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 SELPP16109 830 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 SLC1A2P43004 574 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 ASMTP46597 345 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 ATXN1P54253 815 aaKnown RBP10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 PRKD1Q15139 912 aaPredicted RBP10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 DPYSL2Q16555 572 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 SLC24A5Q71RS6 500 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 CXXC5Q7LFL8 322 aaKnown RBP10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 PRRT2Q7Z6L0 340 aaPredicted RBP10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 ZNF554Q86TJ5 538 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 SVOPLQ8N434 492 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 SLCO2A1Q92959 643 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 TSSK3Q96PN8 268 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 XPNPEP1Q9NQW7 623 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 PRKAR1AP10644 381 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 ZNF222Q9UK12 451 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 OR10H1Q9Y4A9 318 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 N6AMT1Q9Y5N5 214 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 GRIN2DO15399 1336 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 ABCC6O95255 1503 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 CBFA2T3O75081 653 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 NADKO95544 446 aaPredicted RBP10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 MT-CYBP00156 380 aaPredicted RBP10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 BMP7P18075 431 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 GNA12Q03113 381 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 ALG11Q2TAA5 492 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 SLC9B1Q4ZJI4 515 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 CCNYL2Q5T2Q4 361 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 CHST9Q7L1S5 443 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 CPNE8Q86YQ8 564 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 PDPRQ8NCN5 879 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 GIPC3Q8TF64 312 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 EMID1Q96A84 441 aaPredicted RBP10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 NTPCRQ9BSD7 190 aaKnown RBP10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 MAGEH1Q9H213 219 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 C3orf14Q9HBI5 128 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 H7C0S8 307 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 CCL16O15467 120 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 GPIP06744 558 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 PEX2P28328 305 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 FOXN2P32314 431 aa10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 RPS9P46781 194 aaKnown RBP10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 CWF19L1Q69YN2 538 aaKnown RBP10.83□□□□□ -0.68
SNRNP200-201ENST00000323853 LINGO4Q6UY18 593 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms