RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 NOL6Q9H6R4 1146 aaKnown RBP14.63□□□□□ -0.07
TCOF1-201ENST00000323668 LRTM1Q9HBL6 345 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 PCDHB1Q9Y5F3 818 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 ARL5AQ9Y689 179 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 FAM234BA2RU67 622 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 OR6C75A6NL08 312 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 EPHB3P54753 998 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 GNA12Q03113 381 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 ARMCX4Q5H9R4 360 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 TRNP1Q6NT89 227 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 FAM151BQ6UXP7 276 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 CIR1Q86X95 450 aaPredicted RBP14.63□□□□□ -0.07
TCOF1-201ENST00000323668 CPNE9Q8IYJ1 553 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 SYTL1Q8IYJ3 562 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 ARL10Q8N8L6 244 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 OR7D4Q8NG98 312 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 CLHC1Q8NHS4 586 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 RAB2BQ8WUD1 216 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 REXO5Q96IC2 774 aaKnown RBP14.63□□□□□ -0.07
TCOF1-201ENST00000323668 FEM1CQ96JP0 617 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 TSSK3Q96PN8 268 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 REXO4Q9GZR2 422 aaKnown RBP14.63□□□□□ -0.07
TCOF1-201ENST00000323668 ZNF696Q9H7X3 374 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 ENOPH1Q9UHY7 261 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 PDE10AQ9Y233 779 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 PCDHGC4Q9Y5F7 938 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 SCAMP3O14828 347 aaKnown RBP14.62□□□□□ -0.07
TCOF1-201ENST00000323668 MAPKAPK2P49137 400 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 CNTN1Q12860 1018 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 MYLK3Q32MK0 819 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 MSANTD2Q6P1R3 559 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 CERS6Q6ZMG9 384 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 RAB42Q8N4Z0 105 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 ZFP28Q8NHY6 868 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 ZBED3Q96IU2 234 aaPredicted RBP14.62□□□□□ -0.07
TCOF1-201ENST00000323668 NODALQ96S42 347 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 YTHDF1Q9BYJ9 559 aaKnown RBP14.62□□□□□ -0.07
TCOF1-201ENST00000323668 ASB3Q9Y575 518 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 RREB1Q92766 1687 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 SYNDIG1LA6NDD5 238 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 TBKBP1A7MCY6 615 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 CNPP09543 421 aaKnown RBP14.62□□□□□ -0.07
TCOF1-201ENST00000323668 RAP2AP10114 183 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 NR4A1P22736 598 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 GRK4P32298 578 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 SIM2Q14190 667 aaPredicted RBP14.62□□□□□ -0.07
TCOF1-201ENST00000323668 ARMC4Q5T2S8 1044 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 CILP2Q8IUL8 1156 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 HID1Q8IV36 788 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 OR10A6Q8NH74 314 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 GANCQ8TET4 914 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 RSPH1Q8WYR4 309 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 PPP1R14BQ96C90 147 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 CAMKK2Q96RR4 588 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 EPB41L1Q9H4G0 881 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 RERGLQ9H628 205 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 ABCB10Q9NRK6 738 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 NUDT4Q9NZJ9 180 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 ZNF490Q9ULM2 529 aaPredicted RBP14.62□□□□□ -0.07
TCOF1-201ENST00000323668 DYRK1BQ9Y463 629 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 MANSC4A6NHS7 340 aaPredicted RBP14.62□□□□□ -0.07
TCOF1-201ENST00000323668 FTH1P02794 183 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 CYP4B1P13584 511 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 GLDCP23378 1020 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 MTPNP58546 118 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 ZNF467Q7Z7K2 595 aaPredicted RBP14.62□□□□□ -0.07
TCOF1-201ENST00000323668 CEP97Q8IW35 865 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 PSMA8Q8TAA3 256 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 TMEM209Q96SK2 561 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 MAGEH1Q9H213 219 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 MRM3Q9HC36 420 aaKnown RBP14.62□□□□□ -0.07
TCOF1-201ENST00000323668 KLHL3Q9UH77 587 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 PADI4Q9UM07 663 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 DGKBQ9Y6T7 804 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 PDE4DIPQ5VU43 2346 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 SREBF2Q12772 1141 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 LDLRAP1Q5SW96 308 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 ZUFSPQ96AP4 578 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 CDKN2AIPNLQ96HQ2 116 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 NUAK2Q9H093 628 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 SLC25A13Q9UJS0 675 aa14.62□□□□□ -0.07
TCOF1-201ENST00000323668 A0A1W2PP18 115 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 J3KR12 359 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 SCELO95171 688 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 LRATO95237 230 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 HSPA7P48741 367 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 GPR15P49685 360 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 RAB15P59190 212 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 SCAPQ12770 1279 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 C1DQ13901 141 aaKnown RBP14.61□□□□□ -0.07
TCOF1-201ENST00000323668 TIMM50Q3ZCQ8 353 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 PAGE2BQ5JRK9 111 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 SIRPB2Q5JXA9 342 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 PARP8Q8N3A8 854 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 MIEF1Q9NQG6 463 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 KRT84Q9NSB2 600 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 FNIP2Q9P278 1114 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 SAMD4AQ9UPU9 718 aaKnown RBP14.61□□□□□ -0.07
TCOF1-201ENST00000323668 ANGPTL1O95841 491 aa14.61□□□□□ -0.07
TCOF1-201ENST00000323668 MAPK8P45983 427 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms