RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 NIPSNAP2O75323 286 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 CCNKO75909 580 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 AQP1P29972 269 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 RPL9P32969 192 aaKnown RBP15.16■□□□□ 0.02
VARS2-201ENST00000321897 ST13P50502 369 aaKnown RBP15.16■□□□□ 0.02
VARS2-201ENST00000321897 CCT8P50990 548 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 HK2P52789 917 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 SREBF2Q12772 1141 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 MERTKQ12866 999 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 FBXL22Q6P050 247 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 ZYG11AQ6WRX3 759 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 MARVELD2Q8N4S9 558 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 SMG8Q8ND04 991 aaKnown RBP15.16■□□□□ 0.02
VARS2-201ENST00000321897 C3orf58Q8NDZ4 430 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 SOCS4Q8WXH5 440 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 FAM120BQ96EK7 910 aaKnown RBP15.16■□□□□ 0.02
VARS2-201ENST00000321897 C19orf60Q96EN9 201 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 TPD52L3Q96J77 140 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 YME1L1Q96TA2 773 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 UNC93B1Q9H1C4 597 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 TMLHEQ9NVH6 421 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 SMPD3Q9NY59 655 aaPredicted RBP15.16■□□□□ 0.02
VARS2-201ENST00000321897 CNTN3Q9P232 1028 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 RCOR3Q9P2K3 495 aaPredicted RBP15.16■□□□□ 0.02
VARS2-201ENST00000321897 EVLQ9UI08 416 aaPredicted RBP15.16■□□□□ 0.02
VARS2-201ENST00000321897 FKBPLQ9UIM3 349 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 FCF1Q9Y324 198 aaKnown RBP15.16■□□□□ 0.02
VARS2-201ENST00000321897 PMF1-BGLAPU3KQ54 211 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.16■□□□□ 0.02
VARS2-201ENST00000321897 A0A087X1B8 175 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 CCDC162PA2VCL2 907 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 TMEM114B3SHH9 223 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 TNFRSF21O75509 655 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 RSL1D1O76021 490 aaKnown RBP15.16■□□□□ 0.02
VARS2-201ENST00000321897 LRG1P02750 347 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 BTG3Q14201 252 aaPredicted RBP15.16■□□□□ 0.02
VARS2-201ENST00000321897 ZBED5Q49AG3 693 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 THOC7Q6I9Y2 204 aaKnown RBP15.16■□□□□ 0.02
VARS2-201ENST00000321897 PAQR3Q6TCH7 311 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 C17orf50Q8WW18 174 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 DOCK2Q92608 1830 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 SMIM14Q96QK8 99 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 FEM1AQ9BSK4 669 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 NMUR1Q9HB89 426 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 IMPAD1Q9NX62 359 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 COL16A1Q07092 1604 aaPredicted RBP15.16■□□□□ 0.02
VARS2-201ENST00000321897 SH3PXD2BA1X283 911 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 ANKRD33BA6NCL7 494 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 GLUD2P49448 558 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 PFKPQ01813 784 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 FAM187BQ17R55 369 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 ZNF697Q5TEC3 545 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 ZNF621Q6ZSS3 439 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 SNX29P2Q8IUI4 249 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 CEP97Q8IW35 865 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 C2orf73Q8N5S3 287 aaPredicted RBP15.16■□□□□ 0.02
VARS2-201ENST00000321897 MCFD2Q8NI22 146 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 FETUBQ9UGM5 382 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 EIF2B4Q9UI10 523 aaKnown RBP15.16■□□□□ 0.02
VARS2-201ENST00000321897 ITGB1BP2Q9UKP3 347 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 EIF3LQ9Y262 564 aaKnown RBP15.16■□□□□ 0.02
VARS2-201ENST00000321897 HS3ST4Q9Y661 456 aa15.16■□□□□ 0.02
VARS2-201ENST00000321897 EVPLLA8MZ36 301 aa15.15■□□□□ 0.02
VARS2-201ENST00000321897 NOBOXO60393 691 aa15.15■□□□□ 0.02
VARS2-201ENST00000321897 CYP7B1O75881 506 aa15.15■□□□□ 0.02
VARS2-201ENST00000321897 RECQL5O94762 991 aaPredicted RBP15.15■□□□□ 0.02
VARS2-201ENST00000321897 FADS2O95864 444 aaKnown RBP15.15■□□□□ 0.02
VARS2-201ENST00000321897 RGMBQ6NW40 437 aa15.15■□□□□ 0.02
VARS2-201ENST00000321897 AGMOQ6ZNB7 445 aa15.15■□□□□ 0.02
VARS2-201ENST00000321897 OR10T2Q8NGX3 314 aa15.15■□□□□ 0.02
VARS2-201ENST00000321897 TWIST2Q8WVJ9 160 aa15.15■□□□□ 0.02
VARS2-201ENST00000321897 SEPT8Q92599 483 aa15.15■□□□□ 0.02
VARS2-201ENST00000321897 ZDHHC6Q9H6R6 413 aa15.15■□□□□ 0.02
VARS2-201ENST00000321897 GMEB1Q9Y692 573 aa15.15■□□□□ 0.02
VARS2-201ENST00000321897 HTRA2O43464 458 aaPredicted RBP15.15■□□□□ 0.02
VARS2-201ENST00000321897 OR4F21O95013 312 aa15.15■□□□□ 0.02
VARS2-201ENST00000321897 FTH1P02794 183 aa15.15■□□□□ 0.02
VARS2-201ENST00000321897 IDH2P48735 452 aaKnown RBP15.15■□□□□ 0.02
VARS2-201ENST00000321897 CASP9P55211 416 aa15.15■□□□□ 0.02
VARS2-201ENST00000321897 SPANXN2Q5MJ10 180 aa15.15■□□□□ 0.02
VARS2-201ENST00000321897 HECTD3Q5T447 861 aa15.15■□□□□ 0.02
VARS2-201ENST00000321897 CLYBLQ8N0X4 340 aa15.15■□□□□ 0.02
VARS2-201ENST00000321897 TAGAPQ8N103 731 aa15.15■□□□□ 0.02
VARS2-201ENST00000321897 SIDT2Q8NBJ9 832 aaKnown RBP15.15■□□□□ 0.02
VARS2-201ENST00000321897 OR56A4Q8NGH8 313 aa15.15■□□□□ 0.02
VARS2-201ENST00000321897 ACBD6Q9BR61 282 aa15.15■□□□□ 0.02
VARS2-201ENST00000321897 COMMD8Q9NX08 183 aa15.15■□□□□ 0.02
VARS2-201ENST00000321897 ZFP37Q9Y6Q3 630 aaPredicted RBP15.15■□□□□ 0.02
VARS2-201ENST00000321897 HNRNPCL2B2RXH8 293 aa15.15■□□□□ 0.02
VARS2-201ENST00000321897 NBNO60934 754 aa15.15■□□□□ 0.02
VARS2-201ENST00000321897 MED26O95402 600 aa15.15■□□□□ 0.02
VARS2-201ENST00000321897 URODP06132 367 aa15.15■□□□□ 0.02
VARS2-201ENST00000321897 AZGP1P25311 298 aaKnown RBP15.15■□□□□ 0.02
VARS2-201ENST00000321897 HSPA7P48741 367 aa15.15■□□□□ 0.02
VARS2-201ENST00000321897 INSCQ1MX18 579 aa15.15■□□□□ 0.02
VARS2-201ENST00000321897 TSTD2Q5T7W7 516 aa15.15■□□□□ 0.02
VARS2-201ENST00000321897 UBE2J2Q8N2K1 259 aa15.15■□□□□ 0.02
VARS2-201ENST00000321897 TXNDC5Q8NBS9 432 aaKnown RBP15.15■□□□□ 0.02
VARS2-201ENST00000321897 ZNF540Q8NDQ6 660 aa15.15■□□□□ 0.02
VARS2-201ENST00000321897 CAPN10Q9HC96 672 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms