RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 PDLIM5Q96HC4 596 aaKnown RBP3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 MS4A14Q96JA4 679 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 CAPZA3Q96KX2 299 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 SIGLEC10Q96LC7 697 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 KLHL32Q96NJ5 620 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 AP1M1Q9BXS5 423 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 B3GNT4Q9C0J1 378 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 LRRC4CQ9HCJ2 640 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 PCDH12Q9NPG4 1184 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 SPATA6Q9NWH7 488 aaPredicted RBP3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 MOCS1Q9NZB8 636 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 GNPTGQ9UJJ9 305 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 STK38LQ9Y2H1 464 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 GPC6Q9Y625 555 aaPredicted RBP3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 MYO10Q9HD67 2058 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 FAM159BA6NKW6 160 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 ZNF839A8K0R7 811 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 MUSKO15146 869 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 STX7O15400 261 aaKnown RBP3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 LDB2O43679 373 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 MED26O95402 600 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 CER1O95813 267 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 FTH1P02794 183 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 SYPP08247 313 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 ENO2P09104 434 aaPredicted RBP3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 ZNF7P17097 686 aaPredicted RBP3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 CXCR5P32302 372 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 NSG1P42857 185 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 LEPRP48357 1165 aaKnown RBP3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 PSMD8P48556 350 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 TPMTP51580 245 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 PFN3P60673 137 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 IRX1P78414 480 aaPredicted RBP3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 ITKQ08881 620 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 MGAT5Q09328 741 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 HYAL2Q12891 473 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 GTF2H3Q13889 308 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 TMED2Q15363 201 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 CNGA3Q16281 694 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 DUOXA1Q1HG43 343 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 PLEKHS1Q5SXH7 462 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 FAM45BPQ6NSW5 357 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 ZDHHC24Q6UX98 284 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 CCNI2Q6ZMN8 369 aaPredicted RBP3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 CAND1Q86VP6 1230 aaKnown RBP3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 NAT16Q8N8M0 369 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 TMEM145Q8NBT3 493 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 FAM45AQ8TCE6 357 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 STON2Q8WXE9 905 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 ATG4AQ8WYN0 398 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 PBXIP1Q96AQ6 731 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 ALKBH8Q96BT7 664 aaKnown RBP3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 AGAP3Q96P47 875 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 RBM15Q96T37 977 aaKnown RBP eCLIP3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 CYTH2Q99418 400 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 RAB11FIP5Q9BXF6 653 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 ACSS3Q9H6R3 686 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 FBXL12Q9NXK8 326 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 SEPT10Q9P0V9 454 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 LGALS13Q9UHV8 139 aa3.27□□□□□ -1.89
SCAMP1-201ENST00000320280 ZFC3H1O60293 1989 aaKnown RBP3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 GLYATL1P3A0A0U1RQE8 302 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 SYNDIG1LA6NDD5 238 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 KCNK1O00180 336 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 CACNB4O00305 520 aaPredicted RBP3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 LIN7AO14910 233 aaPredicted RBP3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 CHUKO15111 745 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 CSPG5O95196 566 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 IFNB1P01574 187 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 IL1BP01584 269 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 RPN2P04844 631 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 UGT2B4P06133 528 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 APOA4P06727 396 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 APRTP07741 180 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 ALPIP09923 528 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 SP9P0CG40 484 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 FSTP19883 344 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 GLDCP23378 1020 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 HTR1BP28222 390 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 PREPP48147 710 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 STK19P49842 368 aaPredicted RBP3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 CNTN1Q12860 1018 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 MTAPQ13126 283 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 SGCGQ13326 291 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 NFATC4Q14934 902 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 INSCQ1MX18 579 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 TTLL9Q3SXZ7 439 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 C2orf27AQ580R0 203 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 C10orf62Q5T681 223 aaPredicted RBP3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 AADACL2Q6P093 401 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 SLC23A3Q6PIS1 610 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 CRTC1Q6UUV9 634 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 KLHL7Q8IXQ5 586 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 AADATQ8N5Z0 425 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 C2CD4AQ8NCU7 369 aaPredicted RBP3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 C7orf57Q8NEG2 295 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 LPCAT1Q8NF37 534 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 CYB5D2Q8WUJ1 264 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 COL26A1Q96A83 441 aa3.26□□□□□ -1.89
SCAMP1-201ENST00000320280 RMDN1Q96DB5 314 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms