RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 GDPD5Q8WTR4 605 aa21.07■□□□□ 0.96
ATG4D-201ENST00000309469 SMARCD2Q92925 531 aa21.07■□□□□ 0.96
ATG4D-201ENST00000309469 PBX4Q9BYU1 374 aa21.07■□□□□ 0.96
ATG4D-201ENST00000309469 B4GALT6Q9UBX8 382 aa21.07■□□□□ 0.96
ATG4D-201ENST00000309469 GNPTGQ9UJJ9 305 aa21.07■□□□□ 0.96
ATG4D-201ENST00000309469 WASF2Q9Y6W5 498 aa21.07■□□□□ 0.96
ATG4D-201ENST00000309469 AGAP14A8MT82 685 aa21.06■□□□□ 0.96
ATG4D-201ENST00000309469 SIX3O95343 332 aaPredicted RBP21.06■□□□□ 0.96
ATG4D-201ENST00000309469 ASLP04424 464 aa21.06■□□□□ 0.96
ATG4D-201ENST00000309469 KIRREL3Q8IZU9 778 aa21.06■□□□□ 0.96
ATG4D-201ENST00000309469 NXPE1Q8N323 547 aa21.06■□□□□ 0.96
ATG4D-201ENST00000309469 PHTF2Q8N3S3 785 aa21.06■□□□□ 0.96
ATG4D-201ENST00000309469 FBXO39Q8N4B4 442 aa21.06■□□□□ 0.96
ATG4D-201ENST00000309469 RBM15BQ8NDT2 890 aaKnown RBP21.06■□□□□ 0.96
ATG4D-201ENST00000309469 FAM13CQ8NE31 585 aa21.06■□□□□ 0.96
ATG4D-201ENST00000309469 FGF13Q92913 245 aa21.06■□□□□ 0.96
ATG4D-201ENST00000309469 PBXIP1Q96AQ6 731 aa21.06■□□□□ 0.96
ATG4D-201ENST00000309469 NKX2-4Q9H2Z4 354 aa21.06■□□□□ 0.96
ATG4D-201ENST00000309469 SLC27A6Q9Y2P4 619 aa21.06■□□□□ 0.96
ATG4D-201ENST00000309469 CHUKO15111 745 aa21.06■□□□□ 0.96
ATG4D-201ENST00000309469 TULP3O75386 442 aa21.06■□□□□ 0.96
ATG4D-201ENST00000309469 LEFTY1O75610 366 aa21.06■□□□□ 0.96
ATG4D-201ENST00000309469 C1SP09871 688 aa21.06■□□□□ 0.96
ATG4D-201ENST00000309469 ARSAP15289 507 aa21.06■□□□□ 0.96
ATG4D-201ENST00000309469 TSPAN8P19075 237 aa21.06■□□□□ 0.96
ATG4D-201ENST00000309469 ARSIQ5FYB1 569 aa21.06■□□□□ 0.96
ATG4D-201ENST00000309469 LRRC73Q5JTD7 316 aa21.06■□□□□ 0.96
ATG4D-201ENST00000309469 RARS2Q5T160 578 aaKnown RBP21.06■□□□□ 0.96
ATG4D-201ENST00000309469 FBXO27Q8NI29 283 aa21.06■□□□□ 0.96
ATG4D-201ENST00000309469 MAGEC3Q8TD91 643 aa21.06■□□□□ 0.96
ATG4D-201ENST00000309469 GBF1Q92538 1859 aa21.06■□□□□ 0.96
ATG4D-201ENST00000309469 PDLIM5Q96HC4 596 aaKnown RBP21.06■□□□□ 0.96
ATG4D-201ENST00000309469 MAELQ96JY0 434 aaKnown RBP21.06■□□□□ 0.96
ATG4D-201ENST00000309469 ASB2Q96Q27 587 aa21.06■□□□□ 0.96
ATG4D-201ENST00000309469 FIS1Q9Y3D6 152 aa21.06■□□□□ 0.96
ATG4D-201ENST00000309469 TRAF6Q9Y4K3 522 aa21.06■□□□□ 0.96
ATG4D-201ENST00000309469 PRSS21Q9Y6M0 314 aa21.06■□□□□ 0.96
ATG4D-201ENST00000309469 MNAT1P51948 309 aa21.05■□□□□ 0.96
ATG4D-201ENST00000309469 CDH13P55290 713 aa21.05■□□□□ 0.96
ATG4D-201ENST00000309469 BTKQ06187 659 aa21.05■□□□□ 0.96
ATG4D-201ENST00000309469 KLF10Q13118 480 aa21.05■□□□□ 0.96
ATG4D-201ENST00000309469 ZDHHC20Q5W0Z9 365 aa21.05■□□□□ 0.96
ATG4D-201ENST00000309469 NXNQ6DKJ4 435 aa21.05■□□□□ 0.96
ATG4D-201ENST00000309469 RFLNAQ6ZTI6 216 aa21.05■□□□□ 0.96
ATG4D-201ENST00000309469 CLDN19Q8N6F1 224 aa21.05■□□□□ 0.96
ATG4D-201ENST00000309469 MCUR1Q96AQ8 359 aa21.05■□□□□ 0.96
ATG4D-201ENST00000309469 CMTM5Q96DZ9 223 aa21.05■□□□□ 0.96
ATG4D-201ENST00000309469 ZFYVE19Q96K21 471 aa21.05■□□□□ 0.96
ATG4D-201ENST00000309469 EBF3Q9H4W6 596 aa21.05■□□□□ 0.96
ATG4D-201ENST00000309469 DZANK1Q9NVP4 752 aa21.05■□□□□ 0.96
ATG4D-201ENST00000309469 LRRC14BA6NHZ5 514 aa21.04■□□□□ 0.96
ATG4D-201ENST00000309469 SDHDO14521 159 aa21.04■□□□□ 0.96
ATG4D-201ENST00000309469 KLK8O60259 260 aa21.04■□□□□ 0.96
ATG4D-201ENST00000309469 NFATC1O95644 943 aa21.04■□□□□ 0.96
ATG4D-201ENST00000309469 NAA25Q14CX7 972 aa21.04■□□□□ 0.96
ATG4D-201ENST00000309469 PPP2R2DQ66LE6 453 aa21.04■□□□□ 0.96
ATG4D-201ENST00000309469 MACC1Q6ZN28 852 aa21.04■□□□□ 0.96
ATG4D-201ENST00000309469 ETFBKMTQ8IXQ9 262 aa21.04■□□□□ 0.96
ATG4D-201ENST00000309469 NAT14Q8WUY8 206 aa21.04■□□□□ 0.96
ATG4D-201ENST00000309469 PLEKHG4BQ96PX9 1271 aa21.04■□□□□ 0.96
ATG4D-201ENST00000309469 CDCA3Q99618 268 aaPredicted RBP21.04■□□□□ 0.96
ATG4D-201ENST00000309469 C1orf21Q9H246 121 aa21.04■□□□□ 0.96
ATG4D-201ENST00000309469 MTG2Q9H4K7 406 aa21.04■□□□□ 0.96
ATG4D-201ENST00000309469 CD248Q9HCU0 757 aa21.04■□□□□ 0.96
ATG4D-201ENST00000309469 IL36AQ9UHA7 158 aa21.04■□□□□ 0.96
ATG4D-201ENST00000309469 TSPAN11A1L157 253 aa21.04■□□□□ 0.96
ATG4D-201ENST00000309469 WFS1O76024 890 aa21.04■□□□□ 0.96
ATG4D-201ENST00000309469 EEF1DP29692 281 aaKnown RBP21.04■□□□□ 0.96
ATG4D-201ENST00000309469 PRDX6P30041 224 aa21.04■□□□□ 0.96
ATG4D-201ENST00000309469 SPINT3P49223 89 aa21.04■□□□□ 0.96
ATG4D-201ENST00000309469 SATB1Q01826 763 aa21.04■□□□□ 0.96
ATG4D-201ENST00000309469 GPSM1Q86YR5 675 aa21.04■□□□□ 0.96
ATG4D-201ENST00000309469 CPSF7Q8N684 471 aaKnown RBP21.04■□□□□ 0.96
ATG4D-201ENST00000309469 POU5F2Q8N7G0 328 aa21.04■□□□□ 0.96
ATG4D-201ENST00000309469 APOL5Q9BWW9 433 aa21.04■□□□□ 0.96
ATG4D-201ENST00000309469 IGFLR1Q9H665 355 aa21.04■□□□□ 0.96
ATG4D-201ENST00000309469 ELOVL2Q9NXB9 296 aa21.04■□□□□ 0.96
ATG4D-201ENST00000309469 TMCO1Q9UM00 188 aa21.04■□□□□ 0.96
ATG4D-201ENST00000309469 HEPACAM2A8MVW5 462 aa21.03■□□□□ 0.96
ATG4D-201ENST00000309469 STX16-NPEPL1H3BU86 382 aa21.03■□□□□ 0.96
ATG4D-201ENST00000309469 STX16O14662 325 aa21.03■□□□□ 0.96
ATG4D-201ENST00000309469 SKAP2O75563 359 aaPredicted RBP21.03■□□□□ 0.96
ATG4D-201ENST00000309469 CDK14O94921 469 aa21.03■□□□□ 0.96
ATG4D-201ENST00000309469 SLC25A14O95258 325 aaPredicted RBP21.03■□□□□ 0.96
ATG4D-201ENST00000309469 CTSLP07711 333 aa21.03■□□□□ 0.96
ATG4D-201ENST00000309469 CYP2A6P11509 494 aaPredicted RBP21.03■□□□□ 0.96
ATG4D-201ENST00000309469 ITGB6P18564 788 aa21.03■□□□□ 0.96
ATG4D-201ENST00000309469 COPAP53621 1224 aa21.03■□□□□ 0.96
ATG4D-201ENST00000309469 ST8SIA6P61647 398 aa21.03■□□□□ 0.96
ATG4D-201ENST00000309469 SH3BP2P78314 561 aa21.03■□□□□ 0.96
ATG4D-201ENST00000309469 ARHGEF7Q14155 803 aa21.03■□□□□ 0.96
ATG4D-201ENST00000309469 ATP13A5Q4VNC0 1218 aa21.03■□□□□ 0.96
ATG4D-201ENST00000309469 GET4Q7L5D6 327 aaPredicted RBP21.03■□□□□ 0.96
ATG4D-201ENST00000309469 CEP70Q8NHQ1 597 aa21.03■□□□□ 0.96
ATG4D-201ENST00000309469 LKAAEAR1Q8TD35 194 aa21.03■□□□□ 0.96
ATG4D-201ENST00000309469 LRIG1Q96JA1 1093 aa21.03■□□□□ 0.96
ATG4D-201ENST00000309469 MMADHCQ9H3L0 296 aaPredicted RBP21.03■□□□□ 0.96
ATG4D-201ENST00000309469 MEAF6Q9HAF1 191 aa21.03■□□□□ 0.96
ATG4D-201ENST00000309469 ZDHHC3Q9NYG2 299 aa21.03■□□□□ 0.96
ATG4D-201ENST00000309469 GDE1Q9NZC3 331 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms