RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 BYSLQ13895 437 aaKnown RBP8.22□□□□□ -1.09
CHD6-201ENST00000309279 ALG11Q2TAA5 492 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 AARDQ4LEZ3 155 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 USP39Q53GS9 565 aaKnown RBP8.22□□□□□ -1.09
CHD6-201ENST00000309279 ZNF805Q5CZA5 627 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 NCEH1Q6PIU2 408 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 MEX3BQ6ZN04 569 aaKnown RBP8.22□□□□□ -1.09
CHD6-201ENST00000309279 KBTBD6Q86V97 674 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 KRT73Q86Y46 540 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 CDKL3Q8IVW4 592 aaPredicted RBP8.22□□□□□ -1.09
CHD6-201ENST00000309279 FBXO15Q8NCQ5 510 aaPredicted RBP8.22□□□□□ -1.09
CHD6-201ENST00000309279 AGBL5Q8NDL9 886 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 DENND6BQ8NEG7 585 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 OR6K2Q8NGY2 324 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 ARRDC2Q8TBH0 407 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 ECHDC3Q96DC8 303 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 CCDC74BQ96LY2 380 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 FAM118BQ9BPY3 351 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 TRIM56Q9BRZ2 755 aaKnown RBP8.22□□□□□ -1.09
CHD6-201ENST00000309279 HDAC8Q9BY41 377 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 TPSD1Q9BZJ3 242 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 ZDHHC6Q9H6R6 413 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 NOD2Q9HC29 1040 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 NT5MQ9NPB1 228 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 CCDC177Q9NQR7 707 aaPredicted RBP8.22□□□□□ -1.09
CHD6-201ENST00000309279 FAM153AQ9UHL3 310 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 DNPEPQ9ULA0 475 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 FZD4Q9ULV1 537 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 CLEC4AQ9UMR7 237 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 SDK1Q7Z5N4 2213 aa8.22□□□□□ -1.09
CHD6-201ENST00000309279 TRAV6A0A075B6T7 132 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 IGHV1OR15-9A0A0B4J2B8 117 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.21□□□□□ -1.09
CHD6-201ENST00000309279 C10orf142B7Z368 130 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 H0Y858 1186 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 MEN1O00255 615 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 PGRMC1O00264 195 aaKnown RBP8.21□□□□□ -1.09
CHD6-201ENST00000309279 TRAFD1O14545 582 aaPredicted RBP8.21□□□□□ -1.09
CHD6-201ENST00000309279 ZNF185O15231 689 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 HTRA2O43464 458 aaPredicted RBP8.21□□□□□ -1.09
CHD6-201ENST00000309279 HRO43593 1189 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 FMO6PO60774 539 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 GJB3O75712 270 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 KCNH1O95259 989 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 ITGAVP06756 1048 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 TROVE2P10155 538 aaKnown RBP eCLIP8.21□□□□□ -1.09
CHD6-201ENST00000309279 ALOX12P18054 663 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 ENDOUP21128 410 aaKnown RBP8.21□□□□□ -1.09
CHD6-201ENST00000309279 OXTRP30559 389 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 MC4RP32245 332 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 CD68P34810 354 aaPredicted RBP8.21□□□□□ -1.09
CHD6-201ENST00000309279 PSMD8P48556 350 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 VPS41P49754 854 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 ARPC4P59998 168 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 MAXP61244 160 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 BASP1P80723 227 aaKnown RBP8.21□□□□□ -1.09
CHD6-201ENST00000309279 NIPAL4Q0D2K0 466 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 BLMHQ13867 455 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 IHHQ14623 411 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 DARS2Q6PI48 645 aaKnown RBP8.21□□□□□ -1.09
CHD6-201ENST00000309279 KIAA1324Q6UXG2 1013 aaKnown RBP8.21□□□□□ -1.09
CHD6-201ENST00000309279 GDPD4Q6W3E5 623 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 B3GNT6Q6ZMB0 384 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 RAB11FIP2Q7L804 512 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 ADAT2Q7Z6V5 191 aaKnown RBP8.21□□□□□ -1.09
CHD6-201ENST00000309279 ZNF567Q8N184 647 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 RYBPQ8N488 228 aaPredicted RBP8.21□□□□□ -1.09
CHD6-201ENST00000309279 PRELID2Q8N945 189 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 FAM156AQ8NDB6 213 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 GRIN3AQ8TCU5 1115 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 AGR3Q8TD06 166 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 GAB3Q8WWW8 586 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 KISS1RQ969F8 398 aaPredicted RBP8.21□□□□□ -1.09
CHD6-201ENST00000309279 TADA1Q96BN2 335 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 RTP4Q96DX8 246 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 HSPBAP1Q96EW2 488 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 IMP4Q96G21 291 aaKnown RBP8.21□□□□□ -1.09
CHD6-201ENST00000309279 PPP1R16AQ96I34 528 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 MS4A14Q96JA4 679 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 CABS1Q96KC9 395 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 TMEM74Q96NL1 305 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 SEMA3CQ99985 751 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 FERMT1Q9BQL6 677 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 TMEM121Q9BTD3 319 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 MENTQ9BUN1 341 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 OR10A4Q9H209 315 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 NEUROG2Q9H2A3 272 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 SUV39H2Q9H5I1 410 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 ATP13A3Q9H7F0 1226 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 C10orf88Q9H8K7 445 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 SCUBE2Q9NQ36 999 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 RXFP3Q9NSD7 469 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 FBXL12Q9NXK8 326 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 TUBA8Q9NY65 449 aaPredicted RBP8.21□□□□□ -1.09
CHD6-201ENST00000309279 WSB2Q9NYS7 404 aaPredicted RBP8.21□□□□□ -1.09
CHD6-201ENST00000309279 FETUBQ9UGM5 382 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 POLHQ9Y253 713 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 DRG1Q9Y295 367 aaKnown RBP8.21□□□□□ -1.09
CHD6-201ENST00000309279 WDR37Q9Y2I8 494 aa8.21□□□□□ -1.09
CHD6-201ENST00000309279 LAMA1P25391 3075 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms