RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 GOLGA8CPA6NN73 597 aa16.46■□□□□ 0.23
SSH3-201ENST00000308127 BBIP1A8MTZ0 92 aa16.46■□□□□ 0.23
SSH3-201ENST00000308127 K7EPI3 171 aa16.46■□□□□ 0.23
SSH3-201ENST00000308127 SYNCRIPO60506 623 aaKnown RBP16.46■□□□□ 0.23
SSH3-201ENST00000308127 LCP2Q13094 533 aa16.46■□□□□ 0.23
SSH3-201ENST00000308127 SETMARQ53H47 684 aaPredicted RBP16.46■□□□□ 0.23
SSH3-201ENST00000308127 CD300LGQ6UXG3 332 aa16.46■□□□□ 0.23
SSH3-201ENST00000308127 Q6ZNX1 250 aa16.46■□□□□ 0.23
SSH3-201ENST00000308127 SPRED1Q7Z699 444 aa16.46■□□□□ 0.23
SSH3-201ENST00000308127 SLC15A4Q8N697 577 aa16.46■□□□□ 0.23
SSH3-201ENST00000308127 OR4L1Q8NH43 312 aa16.46■□□□□ 0.23
SSH3-201ENST00000308127 IRGQQ8WZA9 623 aa16.46■□□□□ 0.23
SSH3-201ENST00000308127 ACBD6Q9BR61 282 aa16.46■□□□□ 0.23
SSH3-201ENST00000308127 TBCDQ9BTW9 1192 aa16.46■□□□□ 0.23
SSH3-201ENST00000308127 HGH1Q9BTY7 390 aa16.46■□□□□ 0.23
SSH3-201ENST00000308127 CARS2Q9HA77 564 aaKnown RBP16.46■□□□□ 0.23
SSH3-201ENST00000308127 ATP13A1Q9HD20 1204 aa16.46■□□□□ 0.23
SSH3-201ENST00000308127 FAIMQ9NVQ4 179 aa16.46■□□□□ 0.23
SSH3-201ENST00000308127 SELENONQ9NZV5 590 aa16.46■□□□□ 0.23
SSH3-201ENST00000308127 WARS2Q9UGM6 360 aaKnown RBP16.46■□□□□ 0.23
SSH3-201ENST00000308127 H0Y858 1186 aa16.45■□□□□ 0.22
SSH3-201ENST00000308127 CHRNA1P02708 482 aa16.45■□□□□ 0.22
SSH3-201ENST00000308127 ALBP02768 609 aa16.45■□□□□ 0.22
SSH3-201ENST00000308127 PRKACGP22612 351 aa16.45■□□□□ 0.22
SSH3-201ENST00000308127 HOXC13P31276 330 aa16.45■□□□□ 0.22
SSH3-201ENST00000308127 TBX4P57082 545 aa16.45■□□□□ 0.22
SSH3-201ENST00000308127 ZNF33AQ06730 810 aa16.45■□□□□ 0.22
SSH3-201ENST00000308127 GALNT1Q10472 559 aaPredicted RBP16.45■□□□□ 0.22
SSH3-201ENST00000308127 GLYATQ6IB77 296 aa16.45■□□□□ 0.22
SSH3-201ENST00000308127 ANKRD26P1Q6NSI1 321 aa16.45■□□□□ 0.22
SSH3-201ENST00000308127 KLHL23Q8NBE8 558 aa16.45■□□□□ 0.22
SSH3-201ENST00000308127 OR4K2Q8NGD2 314 aa16.45■□□□□ 0.22
SSH3-201ENST00000308127 RMDN1Q96DB5 314 aa16.45■□□□□ 0.22
SSH3-201ENST00000308127 PLEKHA8Q96JA3 519 aa16.45■□□□□ 0.22
SSH3-201ENST00000308127 MS4A4AQ96JQ5 239 aa16.45■□□□□ 0.22
SSH3-201ENST00000308127 TLR9Q9NR96 1032 aa16.45■□□□□ 0.22
SSH3-201ENST00000308127 MED16Q9Y2X0 877 aa16.45■□□□□ 0.22
SSH3-201ENST00000308127 U3KQV3 271 aa16.45■□□□□ 0.22
SSH3-201ENST00000308127 SLC22A3O75751 556 aa16.45■□□□□ 0.22
SSH3-201ENST00000308127 HMOX2P30519 316 aa16.45■□□□□ 0.22
SSH3-201ENST00000308127 POLR2JP52435 117 aaKnown RBP16.45■□□□□ 0.22
SSH3-201ENST00000308127 BNIP2Q12982 314 aa16.45■□□□□ 0.22
SSH3-201ENST00000308127 AFMIDQ63HM1 303 aa16.45■□□□□ 0.22
SSH3-201ENST00000308127 EFHBQ8N7U6 833 aa16.45■□□□□ 0.22
SSH3-201ENST00000308127 FIG4Q92562 907 aa16.45■□□□□ 0.22
SSH3-201ENST00000308127 TMBIM1Q969X1 311 aa16.45■□□□□ 0.22
SSH3-201ENST00000308127 ARNT2Q9HBZ2 717 aa16.45■□□□□ 0.22
SSH3-201ENST00000308127 PCDH12Q9NPG4 1184 aa16.45■□□□□ 0.22
SSH3-201ENST00000308127 TBC1D23Q9NUY8 699 aa16.45■□□□□ 0.22
SSH3-201ENST00000308127 TNFRSF10BO14763 440 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 SNX2O60749 519 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 PARNO95453 639 aaKnown RBP16.44■□□□□ 0.22
SSH3-201ENST00000308127 FUCA1P04066 466 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 CNPP09543 421 aaKnown RBP16.44■□□□□ 0.22
SSH3-201ENST00000308127 BMP1P13497 986 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 IDO1P14902 403 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 ITGB6P18564 788 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 ALDH4A1P30038 563 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 OR1E1P30953 314 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 RGRP47804 291 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 ATP4BP51164 291 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 MRPS6P82932 125 aaKnown RBP16.44■□□□□ 0.22
SSH3-201ENST00000308127 TSPY1Q01534 308 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 ITGADQ13349 1161 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 LAPTM4AQ15012 233 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 FSCN1Q16658 493 aaKnown RBP16.44■□□□□ 0.22
SSH3-201ENST00000308127 PTPRNQ16849 979 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 ANKS6Q68DC2 871 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 DTWD1Q8N5C7 304 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 ATAD1Q8NBU5 361 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 ACDQ96AP0 544 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 CCDC97Q96F63 343 aaPredicted RBP16.44■□□□□ 0.22
SSH3-201ENST00000308127 PTPN18Q99952 460 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 SPON2Q9BUD6 331 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 ZYG11BQ9C0D3 744 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 PKD2L2Q9NZM6 624 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 PRG3Q9Y2Y8 225 aaPredicted RBP16.44■□□□□ 0.22
SSH3-201ENST00000308127 PTGES3LE9PB15 166 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 M0QZ92 97 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 ZNF135P52742 658 aaPredicted RBP16.44■□□□□ 0.22
SSH3-201ENST00000308127 LSM3P62310 102 aaKnown RBP16.44■□□□□ 0.22
SSH3-201ENST00000308127 CBX3Q13185 183 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 ZNF235Q14590 738 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 TGFBIQ15582 683 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 MEP1AQ16819 746 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 MRNIPQ6NTE8 343 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 PIANPQ8IYJ0 282 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 RSPH1Q8WYR4 309 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 SNX19Q92543 992 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 CSF3RQ99062 836 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 LHPPQ9H008 270 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 NTN4Q9HB63 628 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 PFDN4Q9NQP4 134 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 ZMYM5Q9UJ78 669 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 SLC27A5Q9Y2P5 690 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 COMMD10Q9Y6G5 202 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 ZNF189O75820 626 aaPredicted RBP16.44■□□□□ 0.22
SSH3-201ENST00000308127 OCM2P0CE71 109 aa16.44■□□□□ 0.22
SSH3-201ENST00000308127 OCMP0CE72 109 aaPredicted RBP16.44■□□□□ 0.22
SSH3-201ENST00000308127 AGXTP21549 392 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms