RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 TECPR1Q7Z6L1 1165 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 CACUL1Q86Y37 369 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 NXPE1Q8N323 547 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 IL17RCQ8NAC3 791 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 ZNF398Q8TD17 642 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 BCAS4Q8TDM0 211 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 HEXDCQ8WVB3 486 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 SCAMP4Q969E2 229 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 TSPAN17Q96FV3 270 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 PPP1R16AQ96I34 528 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 UBXN10Q96LJ8 280 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 SLC30A3Q99726 388 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 GABRG3Q99928 467 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 WRAP53Q9BUR4 548 aaKnown RBP6.91□□□□□ -1.3
PTCD2-201ENST00000308077 RSPH9Q9H1X1 276 aaPredicted RBP6.91□□□□□ -1.3
PTCD2-201ENST00000308077 C8orf33Q9H7E9 229 aaPredicted RBP6.91□□□□□ -1.3
PTCD2-201ENST00000308077 GPAMQ9HCL2 828 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 SLCO1B3Q9NPD5 702 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 FGFR1OP2Q9NVK5 253 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 PKD2L2Q9NZM6 624 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 SIRPGQ9P1W8 387 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 CRLS1Q9UJA2 301 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 RUVBL2Q9Y230 463 aaKnown RBP6.91□□□□□ -1.3
PTCD2-201ENST00000308077 COQ6Q9Y2Z9 468 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 PRSS21Q9Y6M0 314 aa6.91□□□□□ -1.3
PTCD2-201ENST00000308077 IQCF5A8MTL0 148 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 TARM1B6A8C7 271 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 C1QTNF3-AMACRE9PGA6 284 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 G3V2L1 256 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 TK2O00142 265 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 NPC1O15118 1278 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 RHOBTB1O94844 696 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 VIMP08670 466 aaKnown RBP6.9□□□□□ -1.3
PTCD2-201ENST00000308077 ELFN1P0C7U0 828 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 CCDC166P0CW27 439 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 COL6A2P12110 1019 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 PKMP14618 531 aaKnown RBP6.9□□□□□ -1.3
PTCD2-201ENST00000308077 IL9P15248 144 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 ZNF37AP17032 561 aaPredicted RBP6.9□□□□□ -1.3
PTCD2-201ENST00000308077 NFKBIAP25963 317 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 ALDH3A1P30838 453 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 LIG3P49916 1009 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 ADARP55265 1226 aaKnown RBP6.9□□□□□ -1.3
PTCD2-201ENST00000308077 HNRNPH2P55795 449 aaKnown RBP6.9□□□□□ -1.3
PTCD2-201ENST00000308077 DCDC1P59894 354 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 B4GALNT1Q00973 533 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 SATB1Q01826 763 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 CNTN1Q12860 1018 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 ILF2Q12905 390 aaKnown RBP6.9□□□□□ -1.3
PTCD2-201ENST00000308077 CSHL1Q14406 222 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 CCDC153Q494R4 210 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 HENMT1Q5T8I9 393 aaKnown RBP6.9□□□□□ -1.3
PTCD2-201ENST00000308077 PIP5KL1Q5T9C9 394 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 PTCRAQ6ISU1 281 aaPredicted RBP6.9□□□□□ -1.3
PTCD2-201ENST00000308077 LRRC8EQ6NSJ5 796 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 FBXL19Q6PCT2 694 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 CERS6Q6ZMG9 384 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 FAM47EQ6ZV65 393 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 ERN2Q76MJ5 926 aaKnown RBP6.9□□□□□ -1.3
PTCD2-201ENST00000308077 DSG4Q86SJ6 1040 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 FSTL5Q8N475 847 aaPredicted RBP6.9□□□□□ -1.3
PTCD2-201ENST00000308077 AADATQ8N5Z0 425 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 CCDC63Q8NA47 563 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 GIMAP7Q8NHV1 300 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 LKAAEAR1Q8TD35 194 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 LRRC8CQ8TDW0 803 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 ZNF473Q8WTR7 871 aaKnown RBP6.9□□□□□ -1.3
PTCD2-201ENST00000308077 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.9□□□□□ -1.3
PTCD2-201ENST00000308077 COQ10AQ96MF6 247 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 HDAC8Q9BY41 377 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 ABCG8Q9H221 673 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 MANSC1Q9H8J5 431 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 NMRAL1Q9HBL8 299 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 CD248Q9HCU0 757 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 NFKBIL1Q9UBC1 381 aaPredicted RBP6.9□□□□□ -1.3
PTCD2-201ENST00000308077 COPG2Q9UBF2 871 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 SERGEFQ9UGK8 458 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 FAM50BQ9Y247 325 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 VPS9D1Q9Y2B5 631 aa6.9□□□□□ -1.3
PTCD2-201ENST00000308077 PIKFYVEQ9Y2I7 2098 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 A0A1W2PQF6 199 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 FADS2P1A8MWK0 482 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 H0Y858 1186 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 H3BMM5 538 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 PRMT5O14744 637 aaPredicted RBP6.89□□□□□ -1.31
PTCD2-201ENST00000308077 PFDN6O15212 129 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 BIRC5O15392 142 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 KLF8O95600 359 aaPredicted RBP6.89□□□□□ -1.31
PTCD2-201ENST00000308077 FGF3P11487 239 aaPredicted RBP6.89□□□□□ -1.31
PTCD2-201ENST00000308077 DRD1P21728 446 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 RPS3P23396 243 aaKnown RBP eCLIP6.89□□□□□ -1.31
PTCD2-201ENST00000308077 NTSR1P30989 418 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 PFKPQ01813 784 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 ELP6Q0PNE2 266 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 CHI3L2Q15782 390 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 CST6Q15828 149 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 ZSCAN26Q16670 478 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 GPR33Q49SQ1 333 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 TMEM52BQ4KMG9 183 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 AGBL4Q5VU57 503 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms