RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 TOP1MTQ969P6 601 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 CDK15Q96Q40 435 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 SORT1Q99523 831 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 DYRK4Q9NR20 520 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 PDE10AQ9Y233 779 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 A0A1W2PPW3 197 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 H3BN98 237 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 J3QRK9 145 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 SLC28A1O00337 649 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 ALDH1A2O94788 518 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 RPLP2P05387 115 aaKnown RBP13.19□□□□□ -0.3
DDX54-201ENST00000306014 OR56A5P0C7T3 313 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 UGT1A1P22309 533 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 UGT1A4P22310 534 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 UGT1A3P35503 534 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 UGT1A5P35504 534 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 GNPDA1P46926 289 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 GSK3BP49841 420 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 MS4A2Q01362 244 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 GNA12Q03113 381 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 SFSWAPQ12872 951 aaKnown RBP13.19□□□□□ -0.3
DDX54-201ENST00000306014 FAM91A1Q658Y4 838 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 CAPSLQ8WWF8 208 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 FBXL8Q96CD0 374 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 NODALQ96S42 347 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 PCDH12Q9NPG4 1184 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 MIEF1Q9NQG6 463 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 KRT84Q9NSB2 600 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 IFT80Q9P2H3 777 aaPredicted RBP13.19□□□□□ -0.3
DDX54-201ENST00000306014 DNMT3LQ9UJW3 386 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 IKZF3Q9UKT9 509 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 SNX6Q9UNH7 406 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 IGKV6D-21A0A0A0MT36 114 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 ANGPTL1O95841 491 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 IFNA14P01570 189 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 SH3D19Q5HYK7 790 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 TRIM74Q86UV6 250 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 TRIM73Q86UV7 250 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 CEP97Q8IW35 865 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 ARL10Q8N8L6 244 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 NAT16Q8N8M0 369 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 SPPL2BQ8TCT7 592 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 TMEM74Q96NL1 305 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 KCNA7Q96RP8 456 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 SMOQ99835 787 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 RBM4BQ9BQ04 359 aaKnown RBP13.18□□□□□ -0.3
DDX54-201ENST00000306014 RBM4Q9BWF3 364 aaKnown RBP13.18□□□□□ -0.3
DDX54-201ENST00000306014 CD320Q9NPF0 282 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 RPS6KA6Q9UK32 745 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 ZNF490Q9ULM2 529 aaPredicted RBP13.18□□□□□ -0.3
DDX54-201ENST00000306014 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.18□□□□□ -0.3
DDX54-201ENST00000306014 KCTD3Q9Y597 815 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 TLL2Q9Y6L7 1015 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 PNMA8CA0A1B0GUJ8 204 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 BCKDKO14874 412 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 DDX5P17844 614 aaKnown RBP13.18□□□□□ -0.3
DDX54-201ENST00000306014 AQP1P29972 269 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 PBX3P40426 434 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 CRATP43155 626 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 SULT2A1Q06520 285 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 DMPKQ09013 629 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 ELAVL2Q12926 359 aaKnown RBP13.18□□□□□ -0.3
DDX54-201ENST00000306014 PARP15Q460N3 678 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 FGD3Q5JSP0 725 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 INTS11Q5TA45 600 aaKnown RBP13.18□□□□□ -0.3
DDX54-201ENST00000306014 CHST15Q7LFX5 561 aaPredicted RBP13.18□□□□□ -0.3
DDX54-201ENST00000306014 HOMEZQ8IX15 550 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 SIDT2Q8NBJ9 832 aaKnown RBP13.18□□□□□ -0.3
DDX54-201ENST00000306014 TRPV3Q8NET8 790 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 MCFD2Q8NI22 146 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 MRPS31Q92665 395 aaKnown RBP13.18□□□□□ -0.3
DDX54-201ENST00000306014 WDR12Q9GZL7 423 aaKnown RBP13.18□□□□□ -0.3
DDX54-201ENST00000306014 NDEL1Q9GZM8 345 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 GDAP2Q9NXN4 497 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 KLHL3Q9UH77 587 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 PADI4Q9UM07 663 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 DOCK2Q92608 1830 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 HNRNPCL2B2RXH8 293 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 ST8SIA6P61647 398 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 MTA1Q13330 715 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 ZNF284Q2VY69 593 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 ANKRD46Q86W74 232 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 HTRA1Q92743 480 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 TMEM159Q96B96 161 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 TRIM45Q9H8W5 580 aaPredicted RBP13.18□□□□□ -0.3
DDX54-201ENST00000306014 EMCNQ9ULC0 261 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 CAB39Q9Y376 341 aaPredicted RBP13.18□□□□□ -0.3
DDX54-201ENST00000306014 RBMX2Q9Y388 322 aaKnown RBP13.18□□□□□ -0.3
DDX54-201ENST00000306014 KLHL33A6NCF5 533 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 J3KR12 359 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 AGRPO00253 132 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 TP73O15350 636 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 GSTM1P09488 218 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 PROZP22891 400 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 IGFBP5P24593 272 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 GPC1P35052 558 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 ZNF423Q2M1K9 1284 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 PNPT1Q8TCS8 783 aaKnown RBP13.18□□□□□ -0.3
DDX54-201ENST00000306014 BRSK1Q8TDC3 778 aa13.18□□□□□ -0.3
DDX54-201ENST00000306014 HAPLN3Q96S86 360 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms