RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 SLC25A14O95258 325 aaPredicted RBP14.38□□□□□ -0.11
SHCBP1-201ENST00000303383 WISP3O95389 354 aaPredicted RBP14.38□□□□□ -0.11
SHCBP1-201ENST00000303383 S100BP04271 92 aaPredicted RBP14.38□□□□□ -0.11
SHCBP1-201ENST00000303383 LHCGRP22888 699 aa14.38□□□□□ -0.11
SHCBP1-201ENST00000303383 PTSQ03393 145 aa14.38□□□□□ -0.11
SHCBP1-201ENST00000303383 GRM2Q14416 872 aa14.38□□□□□ -0.11
SHCBP1-201ENST00000303383 KRT72Q14CN4 511 aa14.38□□□□□ -0.11
SHCBP1-201ENST00000303383 ZNF805Q5CZA5 627 aa14.38□□□□□ -0.11
SHCBP1-201ENST00000303383 ANKRD54Q6NXT1 300 aa14.38□□□□□ -0.11
SHCBP1-201ENST00000303383 KIRREL3Q8IZU9 778 aa14.38□□□□□ -0.11
SHCBP1-201ENST00000303383 CD200R1Q8TD46 325 aa14.38□□□□□ -0.11
SHCBP1-201ENST00000303383 NAT14Q8WUY8 206 aa14.38□□□□□ -0.11
SHCBP1-201ENST00000303383 INPP5DQ92835 1189 aa14.38□□□□□ -0.11
SHCBP1-201ENST00000303383 MCUR1Q96AQ8 359 aa14.38□□□□□ -0.11
SHCBP1-201ENST00000303383 TRMOQ9BU70 441 aa14.38□□□□□ -0.11
SHCBP1-201ENST00000303383 DYRK4Q9NR20 520 aa14.38□□□□□ -0.11
SHCBP1-201ENST00000303383 G3BP2Q9UN86 482 aaKnown RBP14.38□□□□□ -0.11
SHCBP1-201ENST00000303383 PPIL1Q9Y3C6 166 aa14.38□□□□□ -0.11
SHCBP1-201ENST00000303383 CDC7O00311 574 aa14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 MATN2O00339 956 aa14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 SKAP2O75563 359 aaPredicted RBP14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 PRNPP04156 253 aa14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 PTPN4P29074 926 aa14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 ARL1P40616 181 aaPredicted RBP14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 KCNC1P48547 511 aa14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 HERVK_113P63132 956 aa14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 UBAP2LQ14157 1087 aaKnown RBP14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 CDKN3Q16667 212 aa14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 SLC9B1Q4ZJI4 515 aa14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 EPGNQ6UW88 154 aa14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 RPS27LQ71UM5 84 aaKnown RBP14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 GPSM1Q86YR5 675 aa14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 MYO1HQ8N1T3 1032 aa14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 OR8D1Q8WZ84 308 aa14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 ULK4Q96C45 1275 aa14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 FAR2Q96K12 515 aa14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 ERVK-6Q9BXR3 956 aa14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 PCDH12Q9NPG4 1184 aa14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 SPECC1L-ADORA2AF8WAN1 911 aa14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 ALOX15P16050 662 aaPredicted RBP14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 TSPAN8P19075 237 aa14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 NSG1P42857 185 aa14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 SPINT3P49223 89 aa14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 EIF4HQ15056 248 aaKnown RBP14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 TTLL9Q3SXZ7 439 aa14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 HSF5Q4G112 596 aaPredicted RBP14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 NUDT18Q6ZVK8 323 aa14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 CUZD1Q86UP6 607 aa14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 SLC30A3Q99726 388 aa14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 P2RY12Q9H244 342 aa14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 UTP6Q9NYH9 597 aaKnown RBP14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 DHRS7Q9Y394 339 aa14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 NUMBLQ9Y6R0 609 aa14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 NUP210Q8TEM1 1887 aaPredicted RBP14.37□□□□□ -0.11
SHCBP1-201ENST00000303383 HLA-EP13747 358 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 CPA2P48052 419 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 HYAL1Q12794 435 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 TTC31Q49AM3 519 aaPredicted RBP14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 ZNF678Q5SXM1 525 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 MAVSQ7Z434 540 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 SUSD6Q92537 303 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 NXPE3Q969Y0 559 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 PLEKHG4BQ96PX9 1271 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 MYCBPQ99417 103 aaPredicted RBP14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 LRMDAQ9H2I8 198 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 FAM83DQ9H4H8 585 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 WDR55Q9H6Y2 383 aaPredicted RBP14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 ZDHHC3Q9NYG2 299 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 MED16Q9Y2X0 877 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 C16orf96A6NNT2 1141 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 PRRT4C9JH25 899 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 CFAP99D6REC4 459 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 T-ENOLP0DO92 83 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 RPS3P23396 243 aaKnown RBP eCLIP14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 DGKAP23743 735 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 EPHA3P29320 983 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 CDH13P55290 713 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 RUNX3Q13761 415 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 KCNC3Q14003 757 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 ZRSR2Q15696 482 aaKnown RBP14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 ZNF284Q2VY69 593 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 ATP13A5Q4VNC0 1218 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 FRMD7Q6ZUT3 714 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 LSMEM2Q8N112 164 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 PANX3Q96QZ0 392 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 FAM83CQ9BQN1 747 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 LATS2Q9NRM7 1088 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 TAGLN3Q9UI15 199 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 PABPN1LA6NDY0 278 aaKnown RBP14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 PRR5-ARHGAP8B1AHC4 643 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 GAPDHSO14556 408 aaPredicted RBP14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 ECI2O75521 394 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 C1SP09871 688 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 ELFN1P0C7U0 828 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 CD9P21926 228 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 ARHGAP8P85298 464 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 CTC1Q2NKJ3 1217 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 FBXL19Q6PCT2 694 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 ETFBKMTQ8IXQ9 262 aa14.36□□□□□ -0.11
SHCBP1-201ENST00000303383 ZNF513Q8N8E2 541 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms