RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 GATSQ8NAP1 163 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 ITSN1Q15811 1721 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 FAM92AA1XBS5 289 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 LATO43561 262 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 FGF19O95750 216 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 GNALP38405 381 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 LILRA4P59901 499 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 RPL6Q02878 288 aaKnown RBP7.75□□□□□ -1.17
SCN9A-201ENST00000303354 KLF1Q13351 362 aaPredicted RBP7.75□□□□□ -1.17
SCN9A-201ENST00000303354 KPNB1Q14974 876 aaKnown RBP7.75□□□□□ -1.17
SCN9A-201ENST00000303354 ZBTB6Q15916 424 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 RNASEH2BQ5TBB1 312 aaKnown RBP7.75□□□□□ -1.17
SCN9A-201ENST00000303354 ZNF433Q8N7K0 673 aaPredicted RBP7.75□□□□□ -1.17
SCN9A-201ENST00000303354 PHF10Q8WUB8 498 aaKnown RBP7.75□□□□□ -1.17
SCN9A-201ENST00000303354 MR1Q95460 341 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 FRMD8Q9BZ67 464 aaPredicted RBP7.75□□□□□ -1.17
SCN9A-201ENST00000303354 GLOD4Q9HC38 313 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 TMEM138Q9NPI0 162 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 RFXAPO00287 272 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 AVPR1BP47901 424 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 JAG1P78504 1218 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 MLLT1Q03111 559 aaPredicted RBP7.75□□□□□ -1.17
SCN9A-201ENST00000303354 ENPEPQ07075 957 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 ITGADQ13349 1161 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 ODF4Q2M2E3 257 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 OR5AK3PQ8NH89 298 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 HNRNPLLQ8WVV9 542 aaKnown RBP7.75□□□□□ -1.17
SCN9A-201ENST00000303354 NAT9Q9BTE0 207 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 UGT2B28Q9BY64 529 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 PRRG3Q9BZD7 231 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 FOXP3Q9BZS1 431 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 BTBD1Q9H0C5 482 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 DAPK2Q9UIK4 370 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 CLOCKO15516 846 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 TRBC1P01850 177 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 ACADSP16219 412 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 ACVRL1P37023 503 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 ZCWPW2Q504Y3 356 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 LYPLAL1Q5VWZ2 237 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 ZNF730Q6ZMV8 503 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 GPR180Q86V85 440 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 OR10Q1Q8NGQ4 319 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 FAM81AQ8TBF8 368 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.75□□□□□ -1.17
SCN9A-201ENST00000303354 HCN3Q9P1Z3 774 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 WRAP73Q9P2S5 460 aaPredicted RBP7.75□□□□□ -1.17
SCN9A-201ENST00000303354 C2CD2Q9Y426 696 aa7.75□□□□□ -1.17
SCN9A-201ENST00000303354 A6NCN8 305 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 YJEFN3A6XGL0 299 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 E7ENQ6 273 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 SLCO1B7G3V0H7 640 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 SLC16A5O15375 505 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 RFPL2O75678 378 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 MYBL2P10244 700 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 SCTRP47872 440 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 MED22Q15528 200 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 CLVS1Q8IUQ0 354 aaPredicted RBP7.74□□□□□ -1.17
SCN9A-201ENST00000303354 CHST4Q8NCG5 386 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 WDR77Q9BQA1 342 aaPredicted RBP7.74□□□□□ -1.17
SCN9A-201ENST00000303354 POLR3BQ9NW08 1133 aaPredicted RBP7.74□□□□□ -1.17
SCN9A-201ENST00000303354 PPM1HQ9ULR3 514 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 MORC2Q9Y6X9 1032 aaPredicted RBP7.74□□□□□ -1.17
SCN9A-201ENST00000303354 J3QRK9 145 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 TM9SF1O15321 606 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 INSIG1O15503 277 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 SCGNO76038 276 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 CSTF2P33240 577 aaKnown RBP eCLIP7.74□□□□□ -1.171e-6■□□□□ 8
SCN9A-201ENST00000303354 RAB30Q15771 203 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 CPNE9Q8IYJ1 553 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 SLC47A1Q96FL8 570 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 RBM18Q96H35 190 aaKnown RBP7.74□□□□□ -1.17
SCN9A-201ENST00000303354 CSPG4P5Q96PW8 444 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 hCG_1818297A0A087WSY0 165 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 J3KR12 359 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 PRODHO43272 600 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 RPP40O75818 363 aaKnown RBP7.74□□□□□ -1.17
SCN9A-201ENST00000303354 CALB2P22676 271 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 SP140Q13342 867 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 PON2Q15165 354 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 ARMCX4Q5H9R4 360 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 TMEM164Q5U3C3 297 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 IL22RA1Q8N6P7 574 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 TSACCQ96A04 125 aaPredicted RBP7.74□□□□□ -1.17
SCN9A-201ENST00000303354 EPS8L2Q9H6S3 715 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 C3orf14Q9HBI5 128 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 CNGB3Q9NQW8 809 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 THAP1Q9NVV9 213 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 COPS7AQ9UBW8 275 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 VWA7Q9Y334 891 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 ITGA2BP08514 1039 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 ELOAQ14241 798 aaKnown RBP7.74□□□□□ -1.17
SCN9A-201ENST00000303354 SYPL2Q5VXT5 272 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 KATNAL2Q8IYT4 538 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 LIX1Q8N485 282 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 SNX27Q96L92 541 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 AGAP2Q99490 1192 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 GPR174Q9BXC1 333 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 NWD1Q149M9 1564 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 MYADML2A6NDP7 307 aa7.74□□□□□ -1.17
SCN9A-201ENST00000303354 KCNU1A8MYU2 1149 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms