RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 ERVK-6Q9BXR3 956 aa22.08■■□□□ 1.12
SMAD1-201ENST00000302085 PLA2G2FQ9BZM2 168 aa22.08■■□□□ 1.12
SMAD1-201ENST00000302085 PCDH12Q9NPG4 1184 aa22.08■■□□□ 1.12
SMAD1-201ENST00000302085 RNF112Q9ULX5 631 aa22.08■■□□□ 1.12
SMAD1-201ENST00000302085 SORCS3Q9UPU3 1222 aa22.08■■□□□ 1.12
SMAD1-201ENST00000302085 PRR5-ARHGAP8B1AHC4 643 aa22.07■■□□□ 1.12
SMAD1-201ENST00000302085 TMEM233B4DJY2 109 aa22.07■■□□□ 1.12
SMAD1-201ENST00000302085 SLCO1B7G3V0H7 640 aa22.07■■□□□ 1.12
SMAD1-201ENST00000302085 HNRNPCL1O60812 293 aaKnown RBP22.07■■□□□ 1.12
SMAD1-201ENST00000302085 ECI2O75521 394 aa22.07■■□□□ 1.12
SMAD1-201ENST00000302085 PTPN4P29074 926 aa22.07■■□□□ 1.12
SMAD1-201ENST00000302085 VIPR1P32241 457 aa22.07■■□□□ 1.12
SMAD1-201ENST00000302085 RASSF2P50749 326 aa22.07■■□□□ 1.12
SMAD1-201ENST00000302085 ELF3P78545 371 aaPredicted RBP22.07■■□□□ 1.12
SMAD1-201ENST00000302085 ARHGAP8P85298 464 aa22.07■■□□□ 1.12
SMAD1-201ENST00000302085 KDSRQ06136 332 aa22.07■■□□□ 1.12
SMAD1-201ENST00000302085 PFKFB4Q16877 469 aa22.07■■□□□ 1.12
SMAD1-201ENST00000302085 SH2D4BQ5SQS7 431 aa22.07■■□□□ 1.12
SMAD1-201ENST00000302085 NAIF1Q69YI7 327 aaPredicted RBP22.07■■□□□ 1.12
SMAD1-201ENST00000302085 SFTPA1Q8IWL2 248 aa22.07■■□□□ 1.12
SMAD1-201ENST00000302085 LKAAEAR1Q8TD35 194 aa22.07■■□□□ 1.12
SMAD1-201ENST00000302085 LRIG1Q96JA1 1093 aa22.07■■□□□ 1.12
SMAD1-201ENST00000302085 OSBPL1AQ9BXW6 950 aa22.07■■□□□ 1.12
SMAD1-201ENST00000302085 RASSF4Q9H2L5 321 aa22.07■■□□□ 1.12
SMAD1-201ENST00000302085 WDR55Q9H6Y2 383 aaPredicted RBP22.07■■□□□ 1.12
SMAD1-201ENST00000302085 GNPTGQ9UJJ9 305 aa22.07■■□□□ 1.12
SMAD1-201ENST00000302085 LRRC14BA6NHZ5 514 aa22.07■■□□□ 1.12
SMAD1-201ENST00000302085 UPK3BL1B0FP48 263 aa22.07■■□□□ 1.12
SMAD1-201ENST00000302085 UPK3BL2E5RIL1 263 aa22.07■■□□□ 1.12
SMAD1-201ENST00000302085 BTN3A1O00481 513 aa22.07■■□□□ 1.12
SMAD1-201ENST00000302085 UBFD1O14562 309 aaKnown RBP22.07■■□□□ 1.12
SMAD1-201ENST00000302085 JUNP05412 331 aaKnown RBP22.07■■□□□ 1.12
SMAD1-201ENST00000302085 CYP2A6P11509 494 aaPredicted RBP22.07■■□□□ 1.12
SMAD1-201ENST00000302085 CALB2P22676 271 aa22.07■■□□□ 1.12
SMAD1-201ENST00000302085 ATP13A5Q4VNC0 1218 aa22.07■■□□□ 1.12
SMAD1-201ENST00000302085 UTP4Q969X6 686 aaKnown RBP22.07■■□□□ 1.12
SMAD1-201ENST00000302085 PLEKHG4BQ96PX9 1271 aa22.07■■□□□ 1.12
SMAD1-201ENST00000302085 NUF2Q9BZD4 464 aa22.07■■□□□ 1.12
SMAD1-201ENST00000302085 NSUN3Q9H649 340 aaKnown RBP22.07■■□□□ 1.12
SMAD1-201ENST00000302085 EML4Q9HC35 981 aaKnown RBP22.07■■□□□ 1.12
SMAD1-201ENST00000302085 GTSE1Q9NYZ3 720 aa22.07■■□□□ 1.12
SMAD1-201ENST00000302085 DKK3Q9UBP4 350 aa22.07■■□□□ 1.12
SMAD1-201ENST00000302085 GOLGA8QA0A0J9YX86 632 aa22.06■■□□□ 1.12
SMAD1-201ENST00000302085 GOLGA8OA6NCC3 632 aa22.06■■□□□ 1.12
SMAD1-201ENST00000302085 GOLGA8NF8WBI6 632 aa22.06■■□□□ 1.12
SMAD1-201ENST00000302085 SUPT7LO94864 414 aa22.06■■□□□ 1.12
SMAD1-201ENST00000302085 SIX3O95343 332 aaPredicted RBP22.06■■□□□ 1.12
SMAD1-201ENST00000302085 ENO1P06733 434 aaKnown RBP22.06■■□□□ 1.12
SMAD1-201ENST00000302085 ESRRAP11474 423 aaPredicted RBP22.06■■□□□ 1.12
SMAD1-201ENST00000302085 ITGB6P18564 788 aa22.06■■□□□ 1.12
SMAD1-201ENST00000302085 GALNT1Q10472 559 aaPredicted RBP22.06■■□□□ 1.12
SMAD1-201ENST00000302085 MYO9BQ13459 2157 aa22.06■■□□□ 1.12
SMAD1-201ENST00000302085 ARHGEF7Q14155 803 aa22.06■■□□□ 1.12
SMAD1-201ENST00000302085 POM121L1PQ3SYA9 428 aa22.06■■□□□ 1.12
SMAD1-201ENST00000302085 ZDHHC20Q5W0Z9 365 aa22.06■■□□□ 1.12
SMAD1-201ENST00000302085 MACC1Q6ZN28 852 aa22.06■■□□□ 1.12
SMAD1-201ENST00000302085 HSD11B1LQ7Z5J1 315 aa22.06■■□□□ 1.12
SMAD1-201ENST00000302085 CUZD1Q86UP6 607 aa22.06■■□□□ 1.12
SMAD1-201ENST00000302085 PHTF2Q8N3S3 785 aa22.06■■□□□ 1.12
SMAD1-201ENST00000302085 HCAR2Q8TDS4 363 aa22.06■■□□□ 1.12
SMAD1-201ENST00000302085 PPP1R36Q96LQ0 422 aa22.06■■□□□ 1.12
SMAD1-201ENST00000302085 MYADMQ96S97 322 aa22.06■■□□□ 1.12
SMAD1-201ENST00000302085 TMPRSS11EQ9UL52 423 aa22.06■■□□□ 1.12
SMAD1-201ENST00000302085 C16orf96A6NNT2 1141 aa22.05■■□□□ 1.12
SMAD1-201ENST00000302085 SUPT3HB4E1H0 165 aa22.05■■□□□ 1.12
SMAD1-201ENST00000302085 SUPT3HO75486 399 aa22.05■■□□□ 1.12
SMAD1-201ENST00000302085 SLC25A14O95258 325 aaPredicted RBP22.05■■□□□ 1.12
SMAD1-201ENST00000302085 FCHO2Q0JRZ9 810 aa22.05■■□□□ 1.12
SMAD1-201ENST00000302085 PDLIM5Q96HC4 596 aaKnown RBP22.05■■□□□ 1.12
SMAD1-201ENST00000302085 TRMOQ9BU70 441 aa22.05■■□□□ 1.12
SMAD1-201ENST00000302085 TCF7L2Q9NQB0 619 aa22.05■■□□□ 1.12
SMAD1-201ENST00000302085 ZDHHC3Q9NYG2 299 aa22.05■■□□□ 1.12
SMAD1-201ENST00000302085 CD84Q9UIB8 345 aa22.05■■□□□ 1.12
SMAD1-201ENST00000302085 RANBP2P49792 3224 aaKnown RBP22.05■■□□□ 1.12
SMAD1-201ENST00000302085 TRIM16O95361 564 aa22.05■■□□□ 1.12
SMAD1-201ENST00000302085 HLA-EP13747 358 aa22.05■■□□□ 1.12
SMAD1-201ENST00000302085 GFAPP14136 432 aa22.05■■□□□ 1.12
SMAD1-201ENST00000302085 ZNF30P17039 623 aa22.05■■□□□ 1.12
SMAD1-201ENST00000302085 TSPAN8P19075 237 aa22.05■■□□□ 1.12
SMAD1-201ENST00000302085 NCF2P19878 526 aaPredicted RBP22.05■■□□□ 1.12
SMAD1-201ENST00000302085 GRM2Q14416 872 aa22.05■■□□□ 1.12
SMAD1-201ENST00000302085 TBCCQ15814 346 aa22.05■■□□□ 1.12
SMAD1-201ENST00000302085 FNDC3BQ53EP0 1204 aaKnown RBP22.05■■□□□ 1.12
SMAD1-201ENST00000302085 RINLQ6ZS11 566 aa22.05■■□□□ 1.12
SMAD1-201ENST00000302085 RAB44Q7Z6P3 723 aaPredicted RBP22.05■■□□□ 1.12
SMAD1-201ENST00000302085 ABHD8Q96I13 439 aa22.05■■□□□ 1.12
SMAD1-201ENST00000302085 TBC1D10AQ9BXI6 508 aa22.05■■□□□ 1.12
SMAD1-201ENST00000302085 ABCG8Q9H221 673 aa22.05■■□□□ 1.12
SMAD1-201ENST00000302085 PKD2L2Q9NZM6 624 aa22.05■■□□□ 1.12
SMAD1-201ENST00000302085 TAGLN3Q9UI15 199 aa22.05■■□□□ 1.12
SMAD1-201ENST00000302085 SARDHQ9UL12 918 aa22.05■■□□□ 1.12
SMAD1-201ENST00000302085 E9PBE3 544 aa22.04■■□□□ 1.12
SMAD1-201ENST00000302085 NEMP1O14524 444 aa22.04■■□□□ 1.12
SMAD1-201ENST00000302085 KLK8O60259 260 aa22.04■■□□□ 1.12
SMAD1-201ENST00000302085 KLHL41O60662 606 aa22.04■■□□□ 1.12
SMAD1-201ENST00000302085 AOC1P19801 751 aa22.04■■□□□ 1.12
SMAD1-201ENST00000302085 EPHA3P29320 983 aa22.04■■□□□ 1.12
SMAD1-201ENST00000302085 OPRD1P41143 372 aa22.04■■□□□ 1.12
SMAD1-201ENST00000302085 HK3P52790 923 aa22.04■■□□□ 1.12
SMAD1-201ENST00000302085 CDH13P55290 713 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms