RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 TRIM43BA6NCK2 446 aa21.77■■□□□ 1.08
TPM4-201ENST00000300933 SUPT3HB4E1H0 165 aa21.77■■□□□ 1.08
TPM4-201ENST00000300933 SLCO1B7G3V0H7 640 aa21.77■■□□□ 1.08
TPM4-201ENST00000300933 SUPT3HO75486 399 aa21.77■■□□□ 1.08
TPM4-201ENST00000300933 TRMUO75648 421 aaKnown RBP21.77■■□□□ 1.08
TPM4-201ENST00000300933 NELFEP18615 380 aaKnown RBP21.77■■□□□ 1.08
TPM4-201ENST00000300933 THOP1P52888 689 aa21.77■■□□□ 1.08
TPM4-201ENST00000300933 WDR5P61964 334 aaKnown RBP21.77■■□□□ 1.08
TPM4-201ENST00000300933 LYSMD3Q7Z3D4 306 aa21.77■■□□□ 1.08
TPM4-201ENST00000300933 GALNT7Q86SF2 657 aa21.77■■□□□ 1.08
TPM4-201ENST00000300933 LILRA2Q8N149 483 aa21.77■■□□□ 1.08
TPM4-201ENST00000300933 TRIM43Q96BQ3 446 aaPredicted RBP21.77■■□□□ 1.08
TPM4-201ENST00000300933 CFAP97Q9P2B7 532 aa21.77■■□□□ 1.08
TPM4-201ENST00000300933 ARHGAP10A1A4S6 786 aa21.77■■□□□ 1.08
TPM4-201ENST00000300933 FAM58BPP0C7Q3 252 aa21.77■■□□□ 1.08
TPM4-201ENST00000300933 XRCC1P18887 633 aaPredicted RBP21.77■■□□□ 1.08
TPM4-201ENST00000300933 EMP3P54852 163 aa21.77■■□□□ 1.08
TPM4-201ENST00000300933 MTA1Q13330 715 aa21.77■■□□□ 1.08
TPM4-201ENST00000300933 DCTN2Q13561 401 aaKnown RBP21.77■■□□□ 1.08
TPM4-201ENST00000300933 TYSND1Q2T9J0 566 aa21.77■■□□□ 1.08
TPM4-201ENST00000300933 NCEH1Q6PIU2 408 aa21.77■■□□□ 1.08
TPM4-201ENST00000300933 HMGCLL1Q8TB92 370 aa21.77■■□□□ 1.08
TPM4-201ENST00000300933 MID1IP1Q9NPA3 183 aa21.77■■□□□ 1.08
TPM4-201ENST00000300933 RAB26Q9ULW5 256 aa21.77■■□□□ 1.08
TPM4-201ENST00000300933 NPEPPSL1A6NEC2 478 aa21.76■■□□□ 1.07
TPM4-201ENST00000300933 CLTBP09497 229 aa21.76■■□□□ 1.07
TPM4-201ENST00000300933 ITGB6P18564 788 aa21.76■■□□□ 1.07
TPM4-201ENST00000300933 AGTR2P50052 363 aa21.76■■□□□ 1.07
TPM4-201ENST00000300933 AFTPHQ6ULP2 937 aa21.76■■□□□ 1.07
TPM4-201ENST00000300933 PCDH20Q8N6Y1 951 aaKnown RBP21.76■■□□□ 1.07
TPM4-201ENST00000300933 KYQ8NBH2 561 aa21.76■■□□□ 1.07
TPM4-201ENST00000300933 CCDC126Q96EE4 140 aa21.76■■□□□ 1.07
TPM4-201ENST00000300933 TOX2Q96NM4 488 aa21.76■■□□□ 1.07
TPM4-201ENST00000300933 ADGRE3Q9BY15 652 aa21.76■■□□□ 1.07
TPM4-201ENST00000300933 EML4Q9HC35 981 aaKnown RBP21.76■■□□□ 1.07
TPM4-201ENST00000300933 SEMA4BQ9NPR2 832 aaPredicted RBP21.76■■□□□ 1.07
TPM4-201ENST00000300933 TDRKHQ9Y2W6 561 aaKnown RBP21.76■■□□□ 1.07
TPM4-201ENST00000300933 OR51B4Q9Y5P0 310 aa21.76■■□□□ 1.07
TPM4-201ENST00000300933 TRPC5OSA6NMA1 111 aa21.76■■□□□ 1.07
TPM4-201ENST00000300933 CHRM3P20309 590 aa21.76■■□□□ 1.07
TPM4-201ENST00000300933 HERVK_113P63132 956 aa21.76■■□□□ 1.07
TPM4-201ENST00000300933 RFTN1Q14699 578 aaPredicted RBP21.76■■□□□ 1.07
TPM4-201ENST00000300933 SLC22A9Q8IVM8 553 aa21.76■■□□□ 1.07
TPM4-201ENST00000300933 TCEAL8Q8IYN2 117 aa21.76■■□□□ 1.07
TPM4-201ENST00000300933 AHI1Q8N157 1196 aa21.76■■□□□ 1.07
TPM4-201ENST00000300933 SLC22A17Q8WUG5 538 aa21.76■■□□□ 1.07
TPM4-201ENST00000300933 MYLIPQ8WY64 445 aa21.76■■□□□ 1.07
TPM4-201ENST00000300933 ERVK-6Q9BXR3 956 aa21.76■■□□□ 1.07
TPM4-201ENST00000300933 TAS2R13Q9NYV9 303 aa21.76■■□□□ 1.07
TPM4-201ENST00000300933 STK39Q9UEW8 545 aa21.76■■□□□ 1.07
TPM4-201ENST00000300933 RNF112Q9ULX5 631 aa21.76■■□□□ 1.07
TPM4-201ENST00000300933 OGNP20774 298 aaKnown RBP21.75■■□□□ 1.07
TPM4-201ENST00000300933 ADGRE1Q14246 886 aa21.75■■□□□ 1.07
TPM4-201ENST00000300933 LAYNQ6UX15 382 aa21.75■■□□□ 1.07
TPM4-201ENST00000300933 BHLHE22Q8NFJ8 381 aaPredicted RBP21.75■■□□□ 1.07
TPM4-201ENST00000300933 EEF1AKMT1Q8WVE0 214 aa21.75■■□□□ 1.07
TPM4-201ENST00000300933 MAELQ96JY0 434 aaKnown RBP21.75■■□□□ 1.07
TPM4-201ENST00000300933 ATOH8Q96SQ7 321 aa21.75■■□□□ 1.07
TPM4-201ENST00000300933 PKP2Q99959 881 aa21.75■■□□□ 1.07
TPM4-201ENST00000300933 GPR63Q9BZJ6 419 aa21.75■■□□□ 1.07
TPM4-201ENST00000300933 RC3H2Q9HBD1 1191 aaKnown RBP21.75■■□□□ 1.07
TPM4-201ENST00000300933 TIMMDC1Q9NPL8 285 aa21.75■■□□□ 1.07
TPM4-201ENST00000300933 HCFC1R1Q9NWW0 138 aa21.75■■□□□ 1.07
TPM4-201ENST00000300933 BTRCQ9Y297 605 aa21.75■■□□□ 1.07
TPM4-201ENST00000300933 ARIH1Q9Y4X5 557 aaPredicted RBP21.75■■□□□ 1.07
TPM4-201ENST00000300933 XIRP2A4UGR9 3374 aa21.75■■□□□ 1.07
TPM4-201ENST00000300933 ZBBXA8MT70 800 aa21.75■■□□□ 1.07
TPM4-201ENST00000300933 BTN3A1O00481 513 aa21.75■■□□□ 1.07
TPM4-201ENST00000300933 CDK14O94921 469 aa21.75■■□□□ 1.07
TPM4-201ENST00000300933 NRF1Q16656 503 aa21.75■■□□□ 1.07
TPM4-201ENST00000300933 FAM151BQ6UXP7 276 aa21.75■■□□□ 1.07
TPM4-201ENST00000300933 DDX53Q86TM3 631 aaKnown RBP21.75■■□□□ 1.07
TPM4-201ENST00000300933 RP9Q8TA86 221 aaKnown RBP21.75■■□□□ 1.07
TPM4-201ENST00000300933 TMIGD2Q96BF3 282 aa21.75■■□□□ 1.07
TPM4-201ENST00000300933 ALG14Q96F25 216 aa21.75■■□□□ 1.07
TPM4-201ENST00000300933 ZNF696Q9H7X3 374 aa21.75■■□□□ 1.07
TPM4-201ENST00000300933 GPC4O75487 556 aa21.74■■□□□ 1.07
TPM4-201ENST00000300933 MS4A2Q01362 244 aa21.74■■□□□ 1.07
TPM4-201ENST00000300933 AGKQ53H12 422 aa21.74■■□□□ 1.07
TPM4-201ENST00000300933 CTSL3PQ5NE16 218 aa21.74■■□□□ 1.07
TPM4-201ENST00000300933 SCIMPQ6UWF3 145 aa21.74■■□□□ 1.07
TPM4-201ENST00000300933 CPSF7Q8N684 471 aaKnown RBP21.74■■□□□ 1.07
TPM4-201ENST00000300933 HERC2P3Q9BVR0 1158 aa21.74■■□□□ 1.07
TPM4-201ENST00000300933 ABCG8Q9H221 673 aa21.74■■□□□ 1.07
TPM4-201ENST00000300933 RIMS3Q9UJD0 308 aa21.74■■□□□ 1.07
TPM4-201ENST00000300933 TIMM22Q9Y584 194 aa21.74■■□□□ 1.07
TPM4-201ENST00000300933 UBDO15205 165 aa21.74■■□□□ 1.07
TPM4-201ENST00000300933 ECI2O75521 394 aa21.74■■□□□ 1.07
TPM4-201ENST00000300933 FGF18O76093 207 aa21.74■■□□□ 1.07
TPM4-201ENST00000300933 CDH2P19022 906 aaPredicted RBP21.74■■□□□ 1.07
TPM4-201ENST00000300933 EEF1DP29692 281 aaKnown RBP21.74■■□□□ 1.07
TPM4-201ENST00000300933 PRDX3P30048 256 aaKnown RBP21.74■■□□□ 1.07
TPM4-201ENST00000300933 CD70P32970 193 aa21.74■■□□□ 1.07
TPM4-201ENST00000300933 CTSOP43234 321 aaPredicted RBP21.74■■□□□ 1.07
TPM4-201ENST00000300933 STK19P49842 368 aaPredicted RBP21.74■■□□□ 1.07
TPM4-201ENST00000300933 ART3Q13508 389 aa21.74■■□□□ 1.07
TPM4-201ENST00000300933 CPNE9Q8IYJ1 553 aa21.74■■□□□ 1.07
TPM4-201ENST00000300933 TTC30BQ8N4P2 665 aa21.74■■□□□ 1.07
TPM4-201ENST00000300933 HJURPQ8NCD3 748 aaPredicted RBP21.74■■□□□ 1.07
TPM4-201ENST00000300933 PEX13Q92968 403 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms