RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 SIX5Q8N196 739 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 EEF1AKMT1Q8WVE0 214 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 KIFC1Q9BW19 673 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 PRDM8Q9NQV8 689 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 COMMD9Q9P000 198 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 FNIP2Q9P278 1114 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 STXBP5LQ9Y2K9 1186 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 TIMM13Q9Y5L4 95 aaPredicted RBP11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 SSNA1O43805 119 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 TSPAN3O60637 253 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 COL6A2P12110 1019 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 MTX3Q5HYI7 312 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 POTEHQ6S545 545 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 SERAC1Q96JX3 654 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 BBS4Q96RK4 519 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 RHOJQ9H4E5 214 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 NOL11Q9H8H0 719 aaKnown RBP11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 DNAJC28Q9NX36 388 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 GIN1Q9NXP7 522 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 UXTQ9UBK9 157 aaPredicted RBP11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 TRIOBPQ9H2D6 2365 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 C5orf60A6NFR6 353 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 SLC28A1O00337 649 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 KCNA5P22460 613 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 PPIBP23284 216 aaKnown RBP11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 PTPN3P26045 913 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 PBLDP30039 288 aaPredicted RBP11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 GNA13Q14344 377 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 ZNF438Q7Z4V0 828 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 THAP5Q7Z6K1 395 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 OR2T34Q8NGX1 318 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 OR2T3Q8NH03 318 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 ADAM32Q8TC27 787 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 PHF10Q8WUB8 498 aaKnown RBP11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 NKD2Q969F2 451 aaPredicted RBP11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 MAGEB10Q96LZ2 347 aaPredicted RBP11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 KLHL5Q96PQ7 755 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 SLC38A2Q96QD8 506 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 CRISPLD1Q9H336 500 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 PIGUQ9H490 435 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 FAM124BQ9H5Z6 455 aaPredicted RBP11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 OR12D3Q9UGF7 316 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 LOC110117498-PIK3R3F6TDL0 507 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 GUCY1B2O75343 617 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 TIPRLO75663 272 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 LRIG2O94898 1065 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 DHFRP00374 187 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 NELFEP18615 380 aaKnown RBP11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 MAPKAPK2P49137 400 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 RPL7AP62424 266 aaKnown RBP11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 XKR4Q5GH76 650 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 WSCD1Q658N2 575 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 ADAMTSL2Q86TH1 951 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 ARMC8Q8IUR7 673 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 CD101Q93033 1021 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 CIB1Q99828 191 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 ULBP1Q9BZM6 244 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 ZBP1Q9H171 429 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 DMAC2Q9NW81 257 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 EGFL7Q9UHF1 273 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 ZNF221Q9UK13 617 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 ANGPT4Q9Y264 503 aa11.77□□□□□ -0.52
SYNGAP1-201ENST00000293748 OTCP00480 354 aa11.77□□□□□ -0.53
SYNGAP1-201ENST00000293748 KHDC1Q4VXA5 237 aaKnown RBP11.77□□□□□ -0.53
SYNGAP1-201ENST00000293748 GPR180Q86V85 440 aa11.77□□□□□ -0.53
SYNGAP1-201ENST00000293748 TCAIMQ8N3R3 496 aa11.77□□□□□ -0.53
SYNGAP1-201ENST00000293748 PNPT1Q8TCS8 783 aaKnown RBP11.77□□□□□ -0.53
SYNGAP1-201ENST00000293748 OMDQ99983 421 aa11.77□□□□□ -0.53
SYNGAP1-201ENST00000293748 RHOBTB2Q9BYZ6 727 aa11.77□□□□□ -0.53
SYNGAP1-201ENST00000293748 PTGFRNQ9P2B2 879 aa11.77□□□□□ -0.53
SYNGAP1-201ENST00000293748 TRAF6Q9Y4K3 522 aa11.77□□□□□ -0.53
SYNGAP1-201ENST00000293748 CLDN25C9JDP6 229 aa11.77□□□□□ -0.53
SYNGAP1-201ENST00000293748 PIAS1O75925 651 aa11.77□□□□□ -0.53
SYNGAP1-201ENST00000293748 ECDO95905 644 aaPredicted RBP11.77□□□□□ -0.53
SYNGAP1-201ENST00000293748 NTRK1P04629 796 aa11.77□□□□□ -0.53
SYNGAP1-201ENST00000293748 HNRNPA1P09651 372 aaKnown RBP eCLIP11.77□□□□□ -0.53
SYNGAP1-201ENST00000293748 CRATP43155 626 aa11.77□□□□□ -0.53
SYNGAP1-201ENST00000293748 BCAP31P51572 246 aa11.77□□□□□ -0.53
SYNGAP1-201ENST00000293748 CYP2A13Q16696 494 aa11.77□□□□□ -0.53
SYNGAP1-201ENST00000293748 ADGRD1Q6QNK2 874 aa11.77□□□□□ -0.53
SYNGAP1-201ENST00000293748 PRSS55Q6UWB4 352 aaPredicted RBP11.77□□□□□ -0.53
SYNGAP1-201ENST00000293748 PHACTR4Q8IZ21 702 aa11.77□□□□□ -0.53
SYNGAP1-201ENST00000293748 DSELQ8IZU8 1212 aa11.77□□□□□ -0.53
SYNGAP1-201ENST00000293748 C1orf127Q8N9H9 656 aa11.77□□□□□ -0.53
SYNGAP1-201ENST00000293748 SPATA5L1Q9BVQ7 753 aa11.77□□□□□ -0.53
SYNGAP1-201ENST00000293748 CXorf21Q9HAI6 301 aa11.77□□□□□ -0.53
SYNGAP1-201ENST00000293748 STOML2Q9UJZ1 356 aa11.77□□□□□ -0.53
SYNGAP1-201ENST00000293748 ATP6AP2A0A1C7CYW4 349 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 UGT2B11O75310 529 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 ATP6AP2O75787 350 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 C2P06681 752 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 TGFBR2P37173 567 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 TTPAP49638 278 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 MAB21L3Q8N8X9 362 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 HM13Q8TCT9 377 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 ATL1Q8WXF7 558 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 NELL1Q92832 810 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 UBE2E3Q969T4 207 aa11.76□□□□□ -0.53
SYNGAP1-201ENST00000293748 FAXDC2Q96IV6 333 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms