RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 ANKRD6Q9Y2G4 727 aa10.89□□□□□ -0.67
GGPS1-201ENST00000282841 USH1CQ9Y6N9 552 aa10.89□□□□□ -0.67
GGPS1-201ENST00000282841 A0A087X1B8 175 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 PRR23AA6NEV1 266 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 A8MT66 165 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 BTN3A1O00481 513 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 INPP4BO15327 924 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 PSMC3P17980 439 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 OGNP20774 298 aaKnown RBP10.88□□□□□ -0.67
GGPS1-201ENST00000282841 SCTRP47872 440 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 CSNK1DP48730 415 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 TTPAP49638 278 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 CACNG1Q06432 222 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 UBAP2LQ14157 1087 aaKnown RBP10.88□□□□□ -0.67
GGPS1-201ENST00000282841 AGAP9Q5VTM2 703 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 TXNDC11Q6PKC3 985 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 TERB1Q8NA31 727 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 GABPB2Q8TAK5 448 aaPredicted RBP10.88□□□□□ -0.67
GGPS1-201ENST00000282841 LINGO1Q96FE5 620 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 MARK4Q96L34 752 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 NMUR2Q9GZQ4 415 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 LMAN2LQ9H0V9 348 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 DZANK1Q9NVP4 752 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 TAS2R13Q9NYV9 303 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 A0A1B0GTL3 188 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 ENO4A6NNW6 628 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 KLF11O14901 512 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 KAT7O95251 611 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 CD72P21854 359 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 MAPK8P45983 427 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 AGTR2P50052 363 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 ARHGEF7Q14155 803 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 AAK1Q2M2I8 961 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 KHDC1Q4VXA5 237 aaKnown RBP10.88□□□□□ -0.67
GGPS1-201ENST00000282841 C9orf64Q5T6V5 341 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 KIRREL3Q8IZU9 778 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 LSMEM2Q8N112 164 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 PIAS4Q8N2W9 510 aaPredicted RBP10.88□□□□□ -0.67
GGPS1-201ENST00000282841 PIWIL2Q8TC59 973 aaKnown RBP10.88□□□□□ -0.67
GGPS1-201ENST00000282841 GRAMD1AQ96CP6 724 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 TSPAN17Q96FV3 270 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 C7orf26Q96N11 449 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 SLX1AQ9BQ83 275 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 MRPL57Q9BQC6 102 aaKnown RBP10.88□□□□□ -0.67
GGPS1-201ENST00000282841 CPEB1Q9BZB8 566 aaKnown RBP10.88□□□□□ -0.67
GGPS1-201ENST00000282841 NUF2Q9BZD4 464 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 CEP44Q9C0F1 390 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 ASB1Q9Y576 335 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 CAPN7Q9Y6W3 813 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 COL4A3Q01955 1670 aa10.88□□□□□ -0.67
GGPS1-201ENST00000282841 K7ESM1 405 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 SUPT7LO94864 414 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 SLC25A14O95258 325 aaPredicted RBP10.87□□□□□ -0.67
GGPS1-201ENST00000282841 TIE1P35590 1138 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 SPAM1P38567 509 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 CLNS1AP54105 237 aaKnown RBP10.87□□□□□ -0.67
GGPS1-201ENST00000282841 SLC9B1Q4ZJI4 515 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 CFAP157Q5JU67 520 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 LIPMQ5VYY2 423 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 CHPFQ8IZ52 775 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 SNX31Q8N9S9 440 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 CD200R1Q8TD46 325 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 SCG3Q8WXD2 468 aaKnown RBP10.87□□□□□ -0.67
GGPS1-201ENST00000282841 PEX13Q92968 403 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 RIOK2Q9BVS4 552 aaKnown RBP10.87□□□□□ -0.67
GGPS1-201ENST00000282841 SLC2A11Q9BYW1 496 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 CLPBQ9H078 707 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 TRMT6Q9UJA5 497 aaKnown RBP10.87□□□□□ -0.67
GGPS1-201ENST00000282841 OR2AG2A6NM03 316 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 E9PBE3 544 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 ZSCAN9O15535 394 aaPredicted RBP10.87□□□□□ -0.67
GGPS1-201ENST00000282841 KLHL41O60662 606 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 GUCA1CO95843 209 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 ITGALP20701 1170 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 EPHA3P29320 983 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 PSMD8P48556 350 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 B4GALNT1Q00973 533 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 RCN2Q14257 317 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 ACOX1Q15067 660 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 CLEC6AQ6EIG7 209 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 KLC3Q6P597 504 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 WDR75Q8IWA0 830 aaKnown RBP10.87□□□□□ -0.67
GGPS1-201ENST00000282841 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.87□□□□□ -0.67
GGPS1-201ENST00000282841 PTGR2Q8N8N7 351 aaPredicted RBP10.87□□□□□ -0.67
GGPS1-201ENST00000282841 PIP4K2CQ8TBX8 421 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 ARRDC3Q96B67 414 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 CDCA3Q99618 268 aaPredicted RBP10.87□□□□□ -0.67
GGPS1-201ENST00000282841 COG4Q9H9E3 785 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 INTS10Q9NVR2 710 aaKnown RBP10.87□□□□□ -0.67
GGPS1-201ENST00000282841 ZFP69BQ9UJL9 534 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 SLC8A2Q9UPR5 921 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 PTGDR2Q9Y5Y4 395 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 GOLGA4Q13439 2230 aaKnown RBP10.87□□□□□ -0.67
GGPS1-201ENST00000282841 NUP210Q8TEM1 1887 aaPredicted RBP10.87□□□□□ -0.67
GGPS1-201ENST00000282841 SUPT3HB4E1H0 165 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 PRMT5O14744 637 aaPredicted RBP10.87□□□□□ -0.67
GGPS1-201ENST00000282841 MMP20O60882 483 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 SUPT3HO75486 399 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 WISP3O95389 354 aaPredicted RBP10.87□□□□□ -0.67
GGPS1-201ENST00000282841 ASGR2P07307 311 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms