RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 MTPNP58546 118 aa27.28■■□□□ 1.96
CBX4-201ENST00000269397 SELPLGQ14242 412 aa27.28■■□□□ 1.96
CBX4-201ENST00000269397 AAK1Q2M2I8 961 aa27.28■■□□□ 1.96
CBX4-201ENST00000269397 FAM171BQ6P995 826 aa27.28■■□□□ 1.96
CBX4-201ENST00000269397 GALNT7Q86SF2 657 aa27.28■■□□□ 1.96
CBX4-201ENST00000269397 STK32CQ86UX6 486 aa27.28■■□□□ 1.96
CBX4-201ENST00000269397 TMEM199Q8N511 208 aa27.28■■□□□ 1.96
CBX4-201ENST00000269397 BLOC1S6Q9UL45 172 aa27.28■■□□□ 1.96
CBX4-201ENST00000269397 ECI2O75521 394 aa27.28■■□□□ 1.96
CBX4-201ENST00000269397 CPNE6O95741 557 aa27.28■■□□□ 1.96
CBX4-201ENST00000269397 ZNF12P17014 697 aa27.28■■□□□ 1.96
CBX4-201ENST00000269397 FMO4P31512 558 aa27.28■■□□□ 1.96
CBX4-201ENST00000269397 ARSFP54793 590 aa27.28■■□□□ 1.96
CBX4-201ENST00000269397 XAF1Q6GPH4 301 aa27.28■■□□□ 1.96
CBX4-201ENST00000269397 CIR1Q86X95 450 aaPredicted RBP27.28■■□□□ 1.96
CBX4-201ENST00000269397 TERB1Q8NA31 727 aa27.28■■□□□ 1.96
CBX4-201ENST00000269397 OSCP1Q8WVF1 389 aa27.28■■□□□ 1.96
CBX4-201ENST00000269397 TMBIM1Q969X1 311 aa27.28■■□□□ 1.96
CBX4-201ENST00000269397 CPA4Q9UI42 421 aa27.28■■□□□ 1.96
CBX4-201ENST00000269397 DGKBQ9Y6T7 804 aa27.28■■□□□ 1.96
CBX4-201ENST00000269397 TRIM64BA6NI03 449 aa27.27■■□□□ 1.96
CBX4-201ENST00000269397 F8W810 466 aa27.27■■□□□ 1.96
CBX4-201ENST00000269397 EEDO75530 441 aaKnown RBP27.27■■□□□ 1.96
CBX4-201ENST00000269397 IMPG1Q17R60 797 aa27.27■■□□□ 1.96
CBX4-201ENST00000269397 NLGN2Q8NFZ4 835 aa27.27■■□□□ 1.96
CBX4-201ENST00000269397 ARRDC2Q8TBH0 407 aa27.27■■□□□ 1.96
CBX4-201ENST00000269397 TRNAU1APQ9NX07 287 aaKnown RBP27.27■■□□□ 1.96
CBX4-201ENST00000269397 PAIP2BQ9ULR5 123 aaKnown RBP27.27■■□□□ 1.96
CBX4-201ENST00000269397 OR4Q2P0C623 313 aa27.27■■□□□ 1.96
CBX4-201ENST00000269397 BCAP31P51572 246 aa27.27■■□□□ 1.96
CBX4-201ENST00000269397 UPP1Q16831 310 aa27.27■■□□□ 1.96
CBX4-201ENST00000269397 AASDHQ4L235 1098 aaPredicted RBP27.27■■□□□ 1.96
CBX4-201ENST00000269397 COQ5Q5HYK3 327 aa27.27■■□□□ 1.96
CBX4-201ENST00000269397 ZNF467Q7Z7K2 595 aaPredicted RBP27.27■■□□□ 1.96
CBX4-201ENST00000269397 SFRP1Q8N474 314 aa27.27■■□□□ 1.96
CBX4-201ENST00000269397 TTC16Q8NEE8 873 aa27.27■■□□□ 1.96
CBX4-201ENST00000269397 NSMCE2Q96MF7 247 aa27.27■■□□□ 1.96
CBX4-201ENST00000269397 CDK15Q96Q40 435 aa27.27■■□□□ 1.96
CBX4-201ENST00000269397 ZNF639Q9UID6 485 aa27.27■■□□□ 1.96
CBX4-201ENST00000269397 LEF1Q9UJU2 399 aaPredicted RBP27.27■■□□□ 1.96
CBX4-201ENST00000269397 RHOBTB1O94844 696 aa27.26■■□□□ 1.96
CBX4-201ENST00000269397 CTSHP09668 335 aa27.26■■□□□ 1.96
CBX4-201ENST00000269397 GRSF1Q12849 480 aaKnown RBP eCLIP27.26■■□□□ 1.96
CBX4-201ENST00000269397 ANKS6Q68DC2 871 aa27.26■■□□□ 1.96
CBX4-201ENST00000269397 ANKRD34AQ69YU3 496 aa27.26■■□□□ 1.96
CBX4-201ENST00000269397 MRNIPQ6NTE8 343 aa27.26■■□□□ 1.96
CBX4-201ENST00000269397 R3HCC1LQ7Z5L2 792 aaKnown RBP27.26■■□□□ 1.96
CBX4-201ENST00000269397 TLK2Q86UE8 772 aa27.26■■□□□ 1.96
CBX4-201ENST00000269397 SCN4BQ8IWT1 228 aa27.26■■□□□ 1.96
CBX4-201ENST00000269397 SEMA3CQ99985 751 aa27.26■■□□□ 1.96
CBX4-201ENST00000269397 GALPQ9UBC7 116 aa27.26■■□□□ 1.96
CBX4-201ENST00000269397 ASB1Q9Y576 335 aa27.26■■□□□ 1.96
CBX4-201ENST00000269397 NPEPPSL1A6NEC2 478 aa27.26■■□□□ 1.95
CBX4-201ENST00000269397 SNX2O60749 519 aa27.26■■□□□ 1.95
CBX4-201ENST00000269397 UMPSP11172 480 aa27.26■■□□□ 1.95
CBX4-201ENST00000269397 PPP1R8Q12972 351 aaKnown RBP27.26■■□□□ 1.95
CBX4-201ENST00000269397 RBBP7Q16576 425 aa27.26■■□□□ 1.95
CBX4-201ENST00000269397 EGFLAMQ63HQ2 1017 aa27.26■■□□□ 1.95
CBX4-201ENST00000269397 RHEBL1Q8TAI7 183 aa27.26■■□□□ 1.95
CBX4-201ENST00000269397 ACBD6Q9BR61 282 aa27.26■■□□□ 1.95
CBX4-201ENST00000269397 TFB2MQ9H5Q4 396 aaKnown RBP27.26■■□□□ 1.95
CBX4-201ENST00000269397 C8orf4Q9NR00 106 aa27.26■■□□□ 1.95
CBX4-201ENST00000269397 UPK1AO00322 258 aa27.25■■□□□ 1.95
CBX4-201ENST00000269397 SERPINB7O75635 380 aa27.25■■□□□ 1.95
CBX4-201ENST00000269397 ODC1P11926 461 aa27.25■■□□□ 1.95
CBX4-201ENST00000269397 EEFSECP57772 596 aaKnown RBP27.25■■□□□ 1.95
CBX4-201ENST00000269397 HS3ST5Q8IZT8 346 aa27.25■■□□□ 1.95
CBX4-201ENST00000269397 DTWD1Q8N5C7 304 aa27.25■■□□□ 1.95
CBX4-201ENST00000269397 FNDC5Q8NAU1 212 aa27.25■■□□□ 1.95
CBX4-201ENST00000269397 BPIFB1Q8TDL5 484 aa27.25■■□□□ 1.95
CBX4-201ENST00000269397 CATSPERZQ9NTU4 200 aa27.25■■□□□ 1.95
CBX4-201ENST00000269397 WARS2Q9UGM6 360 aaKnown RBP27.25■■□□□ 1.95
CBX4-201ENST00000269397 SUN2Q9UH99 717 aa27.25■■□□□ 1.95
CBX4-201ENST00000269397 ST3GAL5Q9UNP4 418 aa27.25■■□□□ 1.95
CBX4-201ENST00000269397 CFAP99D6REC4 459 aa27.25■■□□□ 1.95
CBX4-201ENST00000269397 SEC14L2O76054 403 aa27.25■■□□□ 1.95
CBX4-201ENST00000269397 ARL1P40616 181 aaPredicted RBP27.25■■□□□ 1.95
CBX4-201ENST00000269397 CYP2A13Q16696 494 aa27.25■■□□□ 1.95
CBX4-201ENST00000269397 BROXQ5VW32 411 aa27.25■■□□□ 1.95
CBX4-201ENST00000269397 BTLAQ7Z6A9 289 aa27.25■■□□□ 1.95
CBX4-201ENST00000269397 PDPRQ8NCN5 879 aa27.25■■□□□ 1.95
CBX4-201ENST00000269397 STAG3L4Q8TBR4 150 aa27.25■■□□□ 1.95
CBX4-201ENST00000269397 TUBA1CQ9BQE3 449 aa27.25■■□□□ 1.95
CBX4-201ENST00000269397 AARSD1Q9BTE6 412 aaKnown RBP27.25■■□□□ 1.95
CBX4-201ENST00000269397 DGCR6LQ9BY27 220 aa27.25■■□□□ 1.95
CBX4-201ENST00000269397 SMURF2Q9HAU4 748 aa27.25■■□□□ 1.95
CBX4-201ENST00000269397 TMEM9Q9P0T7 183 aa27.25■■□□□ 1.95
CBX4-201ENST00000269397 KERAO60938 352 aa27.24■■□□□ 1.95
CBX4-201ENST00000269397 RXRGP48443 463 aa27.24■■□□□ 1.95
CBX4-201ENST00000269397 TMBIM6P55061 237 aa27.24■■□□□ 1.95
CBX4-201ENST00000269397 CD300CQ08708 224 aa27.24■■□□□ 1.95
CBX4-201ENST00000269397 AGMOQ6ZNB7 445 aa27.24■■□□□ 1.95
CBX4-201ENST00000269397 SPATA19Q7Z5L4 167 aa27.24■■□□□ 1.95
CBX4-201ENST00000269397 FAM86B1Q8N7N1 296 aa27.24■■□□□ 1.95
CBX4-201ENST00000269397 OR4L1Q8NH43 312 aa27.24■■□□□ 1.95
CBX4-201ENST00000269397 MUC13Q9H3R2 512 aa27.24■■□□□ 1.95
CBX4-201ENST00000269397 MUSKO15146 869 aa27.24■■□□□ 1.95
CBX4-201ENST00000269397 PHEXP78562 749 aa27.24■■□□□ 1.95
CBX4-201ENST00000269397 SETMARQ53H47 684 aaPredicted RBP27.24■■□□□ 1.95
CBX4-201ENST00000269397 RIMKLAQ8IXN7 391 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms