RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 SOCS5O75159 536 aa14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 HGFP14210 728 aa14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 VIPR1P32241 457 aa14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 SLC7A9P82251 487 aa14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 PTK2BQ14289 1009 aa14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 INPP5AQ14642 412 aa14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 XKR6Q5GH73 641 aa14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 RANBP10Q6VN20 620 aa14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 FGF13Q92913 245 aa14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 SKA1Q96BD8 255 aa14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 GPR22Q99680 433 aa14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 OR2AG1Q9H205 316 aa14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 ANLNQ9NQW6 1124 aa14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 IQCF5A8MTL0 148 aa14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 PSMD12O00232 456 aaPredicted RBP14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 MMP20O60882 483 aa14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 VPS4BO75351 444 aa14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 HMGA1P17096 107 aaKnown RBP14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 HSPA7P48741 367 aa14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 MAD2L1Q13257 205 aaPredicted RBP14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 RUNX3Q13761 415 aa14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 RNF148Q8N7C7 305 aa14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 MYRFLQ96LU7 910 aa14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 FERD3LQ96RJ6 166 aa14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 NDUFAF1Q9Y375 327 aa14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 KELP23276 732 aa14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 HNF1BP35680 557 aa14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 ARHGDIAP52565 204 aa14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 UBAP2LQ14157 1087 aaKnown RBP14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 HMGB4Q8WW32 186 aa14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 CRISPLD2Q9H0B8 497 aa14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 MOCS1Q9NZB8 636 aa14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 SNX6Q9UNH7 406 aa14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 MRPS17Q9Y2R5 130 aaKnown RBP14.35□□□□□ -0.11
PDLIM2-201ENST00000265810 C16orf96A6NNT2 1141 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 NOL3O60936 208 aaKnown RBP14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 ZMPSTE24O75844 475 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 OAS1P00973 400 aaKnown RBP14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 RPL34P49207 117 aaKnown RBP14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 STC1P52823 247 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 LRRC74AQ0VAA2 488 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 CYTH1Q15438 398 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 PAGE2BQ5JRK9 111 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 KRT80Q6KB66 452 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 C2orf73Q8N5S3 287 aaPredicted RBP14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 ITFG1Q8TB96 612 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 C7orf26Q96N11 449 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 SLC2A11Q9BYW1 496 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 PIF1Q9H611 641 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 MRM3Q9HC36 420 aaKnown RBP14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 SAR1AQ9NR31 198 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 ZDHHC3Q9NYG2 299 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 TIMM22Q9Y584 194 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 ZNF839A8K0R7 811 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 H3BQ06 376 aaPredicted RBP14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 SMAD6O43541 496 aaKnown RBP14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 STK16O75716 305 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 KAT7O95251 611 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 PFKLP17858 780 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 TBL3Q12788 808 aaKnown RBP14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 VWA5B1Q5TIE3 1220 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 ICA1LQ8NDH6 482 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 NUS1Q96E22 293 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 BTBD10Q9BSF8 475 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 RMND5AQ9H871 391 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 NLE1Q9NVX2 485 aaPredicted RBP14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 FBXL12Q9NXK8 326 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 AHSPQ9NZD4 102 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 TRBV23OR9-2A0A075B6M9 112 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 LRRC72A6NJI9 287 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 C5orf58C9J3I9 102 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 SHOX2O60902 331 aaPredicted RBP14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 PROCP04070 461 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 HOXB2P14652 356 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 ALDH9A1P49189 494 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 CCDC157Q569K6 752 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 DNAJC14Q6Y2X3 702 aaPredicted RBP14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 CHST15Q7LFX5 561 aaPredicted RBP14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 ZNF641Q96N77 438 aaPredicted RBP14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 CDCA3Q99618 268 aaPredicted RBP14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 GIMAP4Q9NUV9 329 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 PSMD13Q9UNM6 376 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 SBF1O95248 1867 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 SCN1AP35498 2009 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 AKAP10O43572 662 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 NAA20P61599 178 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 REPS1Q96D71 796 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 CCDC3Q9BQI4 270 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 MIEF1Q9NQG6 463 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 SLC12A4Q9UP95 1085 aa14.34□□□□□ -0.11
PDLIM2-201ENST00000265810 DICER1Q9UPY3 1922 aaKnown RBP14.33□□□□□ -0.11
PDLIM2-201ENST00000265810 ANKDD1BA6NHY2 528 aa14.33□□□□□ -0.11
PDLIM2-201ENST00000265810 MRASO14807 208 aa14.33□□□□□ -0.11
PDLIM2-201ENST00000265810 FSBPO95073 299 aa14.33□□□□□ -0.11
PDLIM2-201ENST00000265810 LDLRAP1Q5SW96 308 aa14.33□□□□□ -0.11
PDLIM2-201ENST00000265810 CYB5D1Q6P9G0 228 aa14.33□□□□□ -0.11
PDLIM2-201ENST00000265810 ZNF781Q8N8C0 355 aa14.33□□□□□ -0.11
PDLIM2-201ENST00000265810 NAT14Q8WUY8 206 aa14.33□□□□□ -0.11
PDLIM2-201ENST00000265810 SCAMP4Q969E2 229 aa14.33□□□□□ -0.11
PDLIM2-201ENST00000265810 TUBGCP5Q96RT8 1024 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms