RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 IRF9Q00978 393 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 RAB39AQ14964 217 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 TIGD6Q17RP2 521 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 RBM20Q5T481 1227 aaKnown RBP13.71□□□□□ -0.21
HCFC2-201ENST00000229330 MBLAC2Q68D91 279 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 STON2Q8WXE9 905 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 FBXL20Q96IG2 436 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 GSDMCQ9BYG8 508 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 NLNQ9BYT8 704 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 CAPN10Q9HC96 672 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 ZSCAN32Q9NX65 697 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 MYPNQ86TC9 1320 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 BCL9LQ86UU0 1499 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 PRAMEF33A0A0G2JMD5 474 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 ISPDA4D126 451 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 H3BNH8 94 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 PRAMEF10O60809 474 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 RSL1D1O76021 490 aaKnown RBP13.71□□□□□ -0.21
HCFC2-201ENST00000229330 SNX4O95219 450 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 SNHG28P0DPA3 235 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 SLC15A1P46059 708 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 AIF1P55008 147 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 CLCQ05315 142 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 TATDN1Q6P1N9 297 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 LCLAT1Q6UWP7 414 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 CHMP1BQ7LBR1 199 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 ZNF567Q8N184 647 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 TRPV3Q8NET8 790 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 TRUB1Q8WWH5 349 aaKnown RBP13.71□□□□□ -0.21
HCFC2-201ENST00000229330 GBA3Q9H227 469 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 MCUBQ9NWR8 336 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 ASB3Q9Y575 518 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 AKAP12Q02952 1782 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 TNFRSF11BO00300 401 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 CXCR6O00574 342 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 EEFSECP57772 596 aaKnown RBP13.71□□□□□ -0.21
HCFC2-201ENST00000229330 MXD1Q05195 221 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 NIPA2Q8N8Q9 360 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 NKX2-3Q8TAU0 364 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 TMEM159Q96B96 161 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 C11orf24Q96F05 449 aaPredicted RBP13.71□□□□□ -0.21
HCFC2-201ENST00000229330 ZNF347Q96SE7 839 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 PDCD10Q9BUL8 212 aa13.71□□□□□ -0.21
HCFC2-201ENST00000229330 PMM2O15305 246 aa13.71□□□□□ -0.22
HCFC2-201ENST00000229330 CYP11A1P05108 521 aa13.71□□□□□ -0.22
HCFC2-201ENST00000229330 GNPDA1P46926 289 aa13.71□□□□□ -0.22
HCFC2-201ENST00000229330 MAPKAPK2P49137 400 aa13.71□□□□□ -0.22
HCFC2-201ENST00000229330 GNG2P59768 71 aa13.71□□□□□ -0.22
HCFC2-201ENST00000229330 MVKQ03426 396 aa13.71□□□□□ -0.22
HCFC2-201ENST00000229330 CPSF6Q16630 551 aaKnown RBP eCLIP13.71□□□□□ -0.22
HCFC2-201ENST00000229330 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.71□□□□□ -0.22
HCFC2-201ENST00000229330 RASAL3Q86YV0 1011 aa13.71□□□□□ -0.22
HCFC2-201ENST00000229330 CCDC28AQ8IWP9 274 aa13.71□□□□□ -0.22
HCFC2-201ENST00000229330 MPP5Q8N3R9 675 aa13.71□□□□□ -0.22
HCFC2-201ENST00000229330 OR10A6Q8NH74 314 aa13.71□□□□□ -0.22
HCFC2-201ENST00000229330 MRPL45Q9BRJ2 306 aaKnown RBP13.71□□□□□ -0.22
HCFC2-201ENST00000229330 ABHD16BQ9H3Z7 469 aa13.71□□□□□ -0.22
HCFC2-201ENST00000229330 FBXO44Q9H4M3 255 aa13.71□□□□□ -0.22
HCFC2-201ENST00000229330 ABCC13Q9NSE7 274 aa13.71□□□□□ -0.22
HCFC2-201ENST00000229330 SIRPGQ9P1W8 387 aa13.71□□□□□ -0.22
HCFC2-201ENST00000229330 PHF11Q9UIL8 331 aa13.71□□□□□ -0.22
HCFC2-201ENST00000229330 CFL2Q9Y281 166 aa13.71□□□□□ -0.22
HCFC2-201ENST00000229330 COQ4Q9Y3A0 265 aa13.71□□□□□ -0.22
HCFC2-201ENST00000229330 GALNT3Q14435 633 aa13.71□□□□□ -0.22
HCFC2-201ENST00000229330 C11orf91Q3C1V1 193 aa13.71□□□□□ -0.22
HCFC2-201ENST00000229330 USP50Q70EL3 339 aaPredicted RBP13.71□□□□□ -0.22
HCFC2-201ENST00000229330 ASCC1Q8N9N2 400 aaKnown RBP13.71□□□□□ -0.22
HCFC2-201ENST00000229330 IL31RAQ8NI17 732 aa13.71□□□□□ -0.22
HCFC2-201ENST00000229330 TEFMQ96QE5 360 aaKnown RBP13.71□□□□□ -0.22
HCFC2-201ENST00000229330 TMEM106CQ9BVX2 250 aa13.71□□□□□ -0.22
HCFC2-201ENST00000229330 RRAGCQ9HB90 399 aa13.71□□□□□ -0.22
HCFC2-201ENST00000229330 ZBTB26Q9HCK0 441 aa13.71□□□□□ -0.22
HCFC2-201ENST00000229330 TEX264Q9Y6I9 313 aa13.71□□□□□ -0.22
HCFC2-201ENST00000229330 PRG2P13727 222 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 SLC6A2P23975 617 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 MRPS5P82675 430 aaKnown RBP13.7□□□□□ -0.22
HCFC2-201ENST00000229330 OGFRL1Q5TC84 451 aaPredicted RBP13.7□□□□□ -0.22
HCFC2-201ENST00000229330 ZDHHC21Q8IVQ6 265 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 CLHC1Q8NHS4 586 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 GAD1Q99259 594 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 B3GNT5Q9BYG0 378 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 ABCG8Q9H221 673 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 TRPM5Q9NZQ8 1165 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 NPEPPSL1A6NEC2 478 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 SLC30A4O14863 429 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 CST3P01034 146 aaPredicted RBP13.7□□□□□ -0.22
HCFC2-201ENST00000229330 UROSP10746 265 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 UBA1P22314 1058 aaKnown RBP13.7□□□□□ -0.22
HCFC2-201ENST00000229330 GLDCP23378 1020 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 NMBRP28336 390 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 CD83Q01151 205 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 MTA1Q13330 715 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 PRR23CQ6ZRP0 262 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 FEM1CQ96JP0 617 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 LRRC3Q9BY71 257 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 TXLNGYQ9BZA5 131 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 PRDM8Q9NQV8 689 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 SLC17A6Q9P2U8 582 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 FAM172BPA6NC97 362 aa13.7□□□□□ -0.22
HCFC2-201ENST00000229330 CASTOR2A6NHX0 329 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms