RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 NPAS2Q99743 824 aa14.29□□□□□ -0.12
PRKAB1-201ENST00000229328 SEMA4BQ9NPR2 832 aaPredicted RBP14.29□□□□□ -0.12
PRKAB1-201ENST00000229328 TDP1Q9NUW8 608 aa14.29□□□□□ -0.12
PRKAB1-201ENST00000229328 GIMAP2Q9UG22 337 aa14.29□□□□□ -0.12
PRKAB1-201ENST00000229328 HS3ST2Q9Y278 367 aa14.29□□□□□ -0.12
PRKAB1-201ENST00000229328 ASB1Q9Y576 335 aa14.29□□□□□ -0.12
PRKAB1-201ENST00000229328 UBDO15205 165 aa14.29□□□□□ -0.12
PRKAB1-201ENST00000229328 PFKLP17858 780 aa14.29□□□□□ -0.12
PRKAB1-201ENST00000229328 NFATC2Q13469 925 aa14.29□□□□□ -0.12
PRKAB1-201ENST00000229328 CCNIQ14094 377 aa14.29□□□□□ -0.12
PRKAB1-201ENST00000229328 HERC3Q15034 1050 aa14.29□□□□□ -0.12
PRKAB1-201ENST00000229328 C22orf39Q6P5X5 142 aa14.29□□□□□ -0.12
PRKAB1-201ENST00000229328 LARP4Q71RC2 724 aaKnown RBP eCLIP14.29□□□□□ -0.12
PRKAB1-201ENST00000229328 BBS2Q9BXC9 721 aa14.29□□□□□ -0.12
PRKAB1-201ENST00000229328 UTP6Q9NYH9 597 aaKnown RBP14.29□□□□□ -0.12
PRKAB1-201ENST00000229328 STOML1Q9UBI4 398 aa14.29□□□□□ -0.12
PRKAB1-201ENST00000229328 POMPQ9Y244 141 aa14.29□□□□□ -0.12
PRKAB1-201ENST00000229328 LZTS1Q9Y250 596 aa14.29□□□□□ -0.12
PRKAB1-201ENST00000229328 NOTCH4Q99466 2003 aa14.29□□□□□ -0.12
PRKAB1-201ENST00000229328 MTCL1Q9Y4B5 1905 aaKnown RBP14.29□□□□□ -0.12
PRKAB1-201ENST00000229328 SCN8AQ9UQD0 1980 aa14.29□□□□□ -0.12
PRKAB1-201ENST00000229328 AZIN1O14977 448 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 FGF4P08620 206 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 PRDX3P30048 256 aaKnown RBP14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 DPP6P42658 865 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 MTTPP55157 894 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 SNRPD1P62314 119 aaKnown RBP14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 ECT2LQ008S8 904 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 CHRNA6Q15825 494 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 LRRC73Q5JTD7 316 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 UGT3A1Q6NUS8 523 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 CRTC1Q6UUV9 634 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 DPY19L3Q6ZPD9 716 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 STK40Q8N2I9 435 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 TUBB1Q9H4B7 451 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 PPM1HQ9ULR3 514 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 DHRS7Q9Y394 339 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 SYCE1LA8MT33 242 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 PIP5K1BO14986 540 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 KLK8O60259 260 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 RPS17P08708 135 aaKnown RBP14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 HSPA8P11142 646 aaKnown RBP14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 CCNHP51946 323 aaPredicted RBP14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 GEN1Q17RS7 908 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 KANK2Q63ZY3 851 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 CERS6Q6ZMG9 384 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 RFLNAQ6ZTI6 216 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 SNX20Q7Z614 316 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 METTL3Q86U44 580 aaKnown RBP14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 CHST14Q8NCH0 376 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 TWIST2Q8WVJ9 160 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 IRF7Q92985 503 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 PLEKHG4BQ96PX9 1271 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 TMEM106CQ9BVX2 250 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 CIPCQ9C0C6 399 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 ZDHHC6Q9H6R6 413 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 AKTIPQ9H8T0 292 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 COMMD10Q9Y6G5 202 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 ANKRD12Q6UB98 2062 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 GLYATL1P3A0A0U1RQE8 302 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 STX16-NPEPL1H3BU86 382 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 GRM6O15303 877 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 GPC4O75487 556 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 ALDOCP09972 364 aaKnown RBP14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 ENO3P13929 434 aaPredicted RBP14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 TYRP14679 529 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 ANPEPP15144 967 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 MYOGP15173 224 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 GCKP35557 465 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 LCP2Q13094 533 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 CBX2Q14781 532 aaPredicted RBP14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 TMEM215Q68D42 235 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 ANKS6Q68DC2 871 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 PTRHD1Q6GMV3 140 aaKnown RBP14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 GPSM1Q86YR5 675 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 GPR26Q8NDV2 337 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 HIPK4Q8NE63 616 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 PYDC1Q8WXC3 89 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 ING5Q8WYH8 240 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.28□□□□□ -0.121e-14■■■■■ 125.5
PRKAB1-201ENST00000229328 ECHDC3Q96DC8 303 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 ASB2Q96Q27 587 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 SUV39H2Q9H5I1 410 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 PRKAG2Q9UGJ0 569 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 ZNF225Q9UK10 706 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 PCTPQ9UKL6 214 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 BTRCQ9Y297 605 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 LRRC42Q9Y546 428 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 WNT6Q9Y6F9 365 aa14.28□□□□□ -0.12
PRKAB1-201ENST00000229328 TRBV5-4A0A0C4DH59 114 aa14.27□□□□□ -0.13
PRKAB1-201ENST00000229328 LINC01553A4QN01 128 aa14.27□□□□□ -0.13
PRKAB1-201ENST00000229328 PER2O15055 1255 aa14.27□□□□□ -0.13
PRKAB1-201ENST00000229328 CFLARO15519 480 aa14.27□□□□□ -0.13
PRKAB1-201ENST00000229328 HSPA1AP0DMV8 641 aaKnown RBP14.27□□□□□ -0.13
PRKAB1-201ENST00000229328 HSPA1BP0DMV9 641 aaKnown RBP14.27□□□□□ -0.13
PRKAB1-201ENST00000229328 ZNF7P17097 686 aaPredicted RBP14.27□□□□□ -0.13
PRKAB1-201ENST00000229328 LHCGRP22888 699 aa14.27□□□□□ -0.13
PRKAB1-201ENST00000229328 LBX1P52954 281 aa14.27□□□□□ -0.13
PRKAB1-201ENST00000229328 PTK2BQ14289 1009 aa14.27□□□□□ -0.13
PRKAB1-201ENST00000229328 SQLEQ14534 574 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms